RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 NPIPA1Q9UND3 350 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 CCL26Q9Y258 94 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 CBFA2T3O75081 653 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 TRIM3O75382 744 aaPredicted RBP10.87□□□□□ -0.67
PTPRK-221ENST00000532331 BCHEP06276 602 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 STARP49675 285 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 AQP4P55087 323 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 DAG1Q14118 895 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 ADNP2Q6IQ32 1131 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 PNCKQ6P2M8 343 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 TM9SF4Q92544 642 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 TIGARQ9NQ88 270 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 PPP4R1LQ9P1A2 415 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 ACTL7AQ9Y615 435 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 NPIPB15A6NHN6 443 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 SAGE2PA6NJ88 616 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 ANXA2P2A6NMY6 339 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 PDCD5O14737 125 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 PGRP06401 933 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 ANXA2P07355 339 aaKnown RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 CTBP2P56545 445 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 SELENOVP59797 346 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 RBBP4Q09028 425 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 ZNF763Q0D2J5 394 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 SLC10A2Q12908 348 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 NSDHLQ15738 373 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 C5orf22Q49AR2 442 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 CATSPEREQ5SY80 951 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 EPGNQ6UW88 154 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 TMEM173Q86WV6 379 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 LINC00471Q8N535 108 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 TAS2R7Q9NYW3 318 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 PLCL2Q9UPR0 1127 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 ANKRD36CQ5JPF3 1778 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 PRSS38A1L453 326 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 GPR89AB7ZAQ6 455 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 TFECO14948 347 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 SERPINA3P01011 423 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 GPR89BP0CG08 455 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 HOXD9P28356 352 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 HLA-FP30511 346 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 POU6F2P78424 691 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 CDK3Q00526 305 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 CDK6Q00534 326 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 NFATC4Q14934 902 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 LGI4Q8N135 537 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 ZSWIM3Q96MP5 696 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 TTYH1Q9H313 450 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 CXorf21Q9HAI6 301 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 TCF7L1Q9HCS4 588 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 TMEM184CQ9NVA4 438 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 UBAP1Q9NZ09 502 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 USP3Q9Y6I4 520 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 DNMT3AQ9Y6K1 912 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 PAPPAQ13219 1627 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 AQP9O43315 295 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 H1F0P07305 194 aaKnown RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 MATN1P21941 496 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 LEPRP48357 1165 aaKnown RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 RASGEF1BQ0VAM2 473 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 PUM1Q14671 1186 aaKnown RBP eCLIP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 GFOD2Q3B7J2 385 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 LIN52Q52LA3 116 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 SLC2A7Q6PXP3 512 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 KCTD8Q6ZWB6 473 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 OR6N1Q8NGY5 312 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 TMEM234Q8WY98 164 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 MOAP1Q96BY2 351 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 MAP3K3Q99759 626 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 G6PC3Q9BUM1 346 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 CWH43Q9H720 699 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 GIN1Q9NXP7 522 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 PEX16Q9Y5Y5 336 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 MAU2Q9Y6X3 613 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 TRBC2A0A5B9 178 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 A6NL46 340 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 RPLP0P05388 317 aaKnown RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 SRFP11831 508 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 TIMP2P16035 220 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 ZNF3P17036 446 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 GSCP56915 257 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 RPS3AP61247 264 aaKnown RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 UFM1P61960 85 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 FOXK1P85037 733 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 EMX2Q04743 252 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 SLAMF1Q13291 335 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 CRTC2Q53ET0 693 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 FAM69BQ5VUD6 431 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 DNM1P34Q6PK57 102 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 OR52E4Q8NGH9 312 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 HAVCR1Q96D42 359 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 DTD2Q96FN9 168 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 CRELD1Q96HD1 420 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 KAT8Q9H7Z6 458 aaKnown RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 EI24O14681 340 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 CPNE3O75131 537 aaKnown RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 DNAJB13P59910 316 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 DEFB110Q30KQ9 67 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 CYP27C1Q4G0S4 372 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms