RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 SIT1Q9Y3P8 196 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 A8MU76 341 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 M0R296 226 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 AIREO43918 545 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 CBSLP0DN79 551 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 COX7A2P14406 83 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 CBSP35520 551 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 CLK1P49759 484 aaKnown RBP12.47□□□□□ -0.41
RBM39-243ENST00000528062 TPTEP56180 551 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 POM121L1PQ3SYA9 428 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 ZNF404Q494X3 552 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 ARSIQ5FYB1 569 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 STEAP3Q658P3 488 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 CACUL1Q86Y37 369 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 CCDC103Q8IW40 242 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 FAM9CQ8IZT9 166 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 ASB11Q8WXH4 323 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 SH3KBP1Q96B97 665 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 ECHDC3Q96DC8 303 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 GABARAPL3Q9BY60 117 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 RSPH9Q9H1X1 276 aaPredicted RBP12.47□□□□□ -0.41
RBM39-243ENST00000528062 CHST8Q9H2A9 424 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 CD93Q9NPY3 652 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 ZDHHC3Q9NYG2 299 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 ZNF229Q9UJW7 825 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 TMPRSS11EQ9UL52 423 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 DSCR3O14972 297 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 TBX1O43435 398 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 GCM2O75603 506 aaPredicted RBP12.46□□□□□ -0.41
RBM39-243ENST00000528062 SPNP16150 400 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 RRM2P31350 389 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 SEPHS1P49903 392 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 CHIT1Q13231 466 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 BCL2A1Q16548 175 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 CDKL4Q5MAI5 379 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 LRRC66Q68CR7 880 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 ERICH5Q6P6B1 374 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 SYT13Q7L8C5 426 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 CBARPQ8N350 705 aaPredicted RBP12.46□□□□□ -0.41
RBM39-243ENST00000528062 FAM83FQ8NEG4 500 aaPredicted RBP12.46□□□□□ -0.41
RBM39-243ENST00000528062 COPS8Q99627 209 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 CPEB1Q9BZB8 566 aaKnown RBP12.46□□□□□ -0.41
RBM39-243ENST00000528062 MIR1-1HGQ9H1L0 117 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 EPHX3Q9H6B9 360 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 TPT1P8Q9HAU6 139 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 IL36AQ9UHA7 158 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 PSORS1C1Q9UIG5 152 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 POU2F3Q9UKI9 436 aa12.46□□□□□ -0.41
RBM39-243ENST00000528062 RBMX2Q9Y388 322 aaKnown RBP12.46□□□□□ -0.41
RBM39-243ENST00000528062 AGAP5A6NIR3 686 aa12.46□□□□□ -0.42
RBM39-243ENST00000528062 PLK4O00444 970 aa12.46□□□□□ -0.42
RBM39-243ENST00000528062 STK25O00506 426 aa12.46□□□□□ -0.42
RBM39-243ENST00000528062 KCNK2O95069 426 aa12.46□□□□□ -0.42
RBM39-243ENST00000528062 POP4O95707 220 aaKnown RBP12.46□□□□□ -0.42
RBM39-243ENST00000528062 TNFRSF1BP20333 461 aa12.46□□□□□ -0.42
RBM39-243ENST00000528062 LHCGRP22888 699 aa12.46□□□□□ -0.42
RBM39-243ENST00000528062 SRSF11Q05519 484 aaKnown RBP12.46□□□□□ -0.42
RBM39-243ENST00000528062 CDC20Q12834 499 aa12.46□□□□□ -0.42
RBM39-243ENST00000528062 ADNP2Q6IQ32 1131 aa12.46□□□□□ -0.42
RBM39-243ENST00000528062 TRMT11Q7Z4G4 463 aaKnown RBP12.46□□□□□ -0.42
RBM39-243ENST00000528062 LACC1Q8IV20 430 aa12.46□□□□□ -0.42
RBM39-243ENST00000528062 MMAAQ8IVH4 418 aaKnown RBP12.46□□□□□ -0.42
RBM39-243ENST00000528062 MTERF1Q99551 399 aaKnown RBP12.46□□□□□ -0.42
RBM39-243ENST00000528062 C11orf16Q9NQ32 467 aa12.46□□□□□ -0.42
RBM39-243ENST00000528062 RLIMQ9NVW2 624 aa12.46□□□□□ -0.42
RBM39-243ENST00000528062 QPCTLQ9NXS2 382 aa12.46□□□□□ -0.42
RBM39-243ENST00000528062 SERGEFQ9UGK8 458 aa12.46□□□□□ -0.42
RBM39-243ENST00000528062 NUP214P35658 2090 aaPredicted RBP12.45□□□□□ -0.42
RBM39-243ENST00000528062 PIKFYVEQ9Y2I7 2098 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.45□□□□□ -0.42
RBM39-243ENST00000528062 A0A1W2PQ67 120 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 NTRK1P04629 796 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 DBTP11182 482 aaKnown RBP12.45□□□□□ -0.42
RBM39-243ENST00000528062 ACPPP15309 386 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 DRD3P35462 400 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 UGT2B10P36537 528 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 NUDT6P53370 316 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 CRISP3P54108 245 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 PFN3P60673 137 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 PTSQ03393 145 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 GAB1Q13480 694 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 TIGD6Q17RP2 521 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 NEK10Q6ZWH5 1172 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 DNAJC22Q8N4W6 341 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 OR8J2Q8NGG1 315 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 GGHQ92820 318 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 ARRDC3Q96B67 414 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 MRGPRX1Q96LB2 322 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 FEVQ99581 238 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 EPYCQ99645 322 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 C19orf43Q9BQ61 176 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 COL25A1Q9BXS0 654 aaPredicted RBP12.45□□□□□ -0.42
RBM39-243ENST00000528062 C6orf62Q9GZU0 229 aaPredicted RBP12.45□□□□□ -0.42
RBM39-243ENST00000528062 MMP27Q9H306 513 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 RAD18Q9NS91 495 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 DNAJC11Q9NVH1 559 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 FZD4Q9ULV1 537 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 TESMINQ9Y4I5 508 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 PCDHB11Q9Y5F2 797 aa12.45□□□□□ -0.42
RBM39-243ENST00000528062 SPINT1O43278 529 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms