RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 ZNF678Q5SXM1 525 aa16.4■□□□□ 0.22
BEST1-203ENST00000524877 CACTIN-AS1Q8N1I8 211 aa16.4■□□□□ 0.22
BEST1-203ENST00000524877 GRHL3Q8TE85 626 aa16.4■□□□□ 0.22
BEST1-203ENST00000524877 PKP4Q99569 1192 aa16.4■□□□□ 0.22
BEST1-203ENST00000524877 CPNE7Q9UBL6 633 aa16.4■□□□□ 0.22
BEST1-203ENST00000524877 RPH3AQ9Y2J0 694 aaPredicted RBP16.4■□□□□ 0.22
BEST1-203ENST00000524877 WASHC1A8K0Z3 465 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 TOR1BO14657 336 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 FOXD2O60548 495 aaPredicted RBP16.39■□□□□ 0.21
BEST1-203ENST00000524877 CCNB2O95067 398 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 UNC5CO95185 931 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 P04436 131 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 XKP51811 444 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 POU6F2P78424 691 aaPredicted RBP16.39■□□□□ 0.21
BEST1-203ENST00000524877 MRPL58Q14197 206 aaKnown RBP16.39■□□□□ 0.21
BEST1-203ENST00000524877 OR4C11Q6IEV9 310 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 WASH2PQ6VEQ5 465 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 TP53INP2Q8IXH6 220 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 UBE2J2Q8N2K1 259 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 OR2L2Q8NH16 312 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 OR10A6Q8NH74 314 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 ARRDC3Q96B67 414 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 SLC6A14Q9UN76 642 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 SSNA1O43805 119 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 CDKN1CP49918 316 aaPredicted RBP16.39■□□□□ 0.21
BEST1-203ENST00000524877 DNAJB13P59910 316 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 OR4F3Q6IEY1 312 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 OR2A12Q8NGT7 310 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 S100PBPQ96BU1 408 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 FARSBQ9NSD9 589 aaKnown RBP16.39■□□□□ 0.21
BEST1-203ENST00000524877 GSTK1Q9Y2Q3 226 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 TAF1LQ8IZX4 1826 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 C9JVG2 144 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 M0QX08 132 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 HMGA1P17096 107 aaKnown RBP16.39■□□□□ 0.21
BEST1-203ENST00000524877 FDXRP22570 491 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 CTBSQ01459 385 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 CATSPEREQ5SY80 951 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 OR52E8Q6IFG1 317 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 FRMD7Q6ZUT3 714 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 TICAM1Q8IUC6 712 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 RHEBL1Q8TAI7 183 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 FAM120CQ9NX05 1096 aaKnown RBP16.39■□□□□ 0.21
BEST1-203ENST00000524877 CA5BQ9Y2D0 317 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 SPO11Q9Y5K1 396 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 FOXO6A8MYZ6 492 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 CXCR6O00574 342 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 KDM1BQ8NB78 822 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 FAM110BQ8TC76 370 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 CNDP2Q96KP4 475 aaKnown RBP16.39■□□□□ 0.21
BEST1-203ENST00000524877 ZSWIM3Q96MP5 696 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 ASPNQ9BXN1 380 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 PDP1Q9P0J1 537 aaPredicted RBP16.39■□□□□ 0.21
BEST1-203ENST00000524877 DLGAP4Q9Y2H0 992 aa16.39■□□□□ 0.21
BEST1-203ENST00000524877 ANPEPP15144 967 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 SWI5Q1ZZU3 235 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 ELMOD2Q8IZ81 293 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 OR8H3Q8N146 312 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 MDGA1Q8NFP4 955 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 ZNF347Q96SE7 839 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 IL26Q9NPH9 171 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 PPP4R1LQ9P1A2 415 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 FAM92AA1XBS5 289 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 ZBTB11O95625 1053 aaPredicted RBP16.38■□□□□ 0.21
BEST1-203ENST00000524877 PGAM4Q8N0Y7 254 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 GPR26Q8NDV2 337 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 LPAR4Q99677 370 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 MARCH4Q9P2E8 410 aaPredicted RBP16.38■□□□□ 0.21
BEST1-203ENST00000524877 IKZF2Q9UKS7 526 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 HHLA1C9JL84 531 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 CD9P21926 228 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 AGBL5Q8NDL9 886 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 ZNF671Q8TAW3 534 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 ZNF382Q96SR6 550 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 AKTIPQ9H8T0 292 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 TIGARQ9NQ88 270 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 MAU2Q9Y6X3 613 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 MYH11P35749 1972 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 TRIM3O75382 744 aaPredicted RBP16.38■□□□□ 0.21
BEST1-203ENST00000524877 MTHFD1P11586 935 aaKnown RBP16.38■□□□□ 0.21
BEST1-203ENST00000524877 IFI30P13284 250 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 GNG2P59768 71 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 RPS3AP61247 264 aaKnown RBP16.38■□□□□ 0.21
BEST1-203ENST00000524877 MTX3Q5HYI7 312 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 ZNF879B4DU55 563 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 GBAP04062 536 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 CD68P34810 354 aaPredicted RBP16.38■□□□□ 0.21
BEST1-203ENST00000524877 SPPL2CQ8IUH8 684 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 SPEM1Q8N4L4 309 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 OR4C6Q8NH72 309 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 ASB15Q8WXK1 588 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 BOCQ9BWV1 1114 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 TTYH1Q9H313 450 aaPredicted RBP16.38■□□□□ 0.21
BEST1-203ENST00000524877 REEP4Q9H6H4 257 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 ERGIC3Q9Y282 383 aa16.38■□□□□ 0.21
BEST1-203ENST00000524877 RGPD4Q7Z3J3 1758 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 PTGES3LE9PB15 166 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 GPR37L1O60883 481 aa16.37■□□□□ 0.21
BEST1-203ENST00000524877 NME6O75414 186 aaPredicted RBP16.37■□□□□ 0.21
BEST1-203ENST00000524877 SF3B4Q15427 424 aaKnown RBP eCLIP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms