RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 SLC5A12Q1EHB4 618 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 PYCR3Q53H96 274 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 TOR1AIP1Q5JTV8 583 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 TMEM31Q5JXX7 168 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 REEP3Q6NUK4 255 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 UNC5DQ6UXZ4 953 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 RTL10Q7L3V2 364 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 ARMCX6Q7L4S7 300 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 P2RY8Q86VZ1 359 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 AQP11Q8NBQ7 271 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 SRFBP1Q8NEF9 429 aaKnown RBP9.72□□□□□ -0.85
MCF2-209ENST00000520602 OR8K5Q8NH50 307 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 ARMC5Q96C12 935 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 DUS3LQ96G46 650 aaKnown RBP9.72□□□□□ -0.85
MCF2-209ENST00000520602 MIR1-1HGQ9H1L0 117 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 PRDM8Q9NQV8 689 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 DNAAF2Q9NVR5 837 aaKnown RBP9.72□□□□□ -0.85
MCF2-209ENST00000520602 J3QRK9 145 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 CHRM5P08912 532 aaPredicted RBP9.72□□□□□ -0.85
MCF2-209ENST00000520602 CD22P20273 847 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 C5AR1P21730 350 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 ARL4DP49703 201 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 TAS2R41P59536 307 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 RUNX1T1Q06455 604 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 KIAA0040Q15053 153 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 ZNF542PQ5EBM4 170 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 C9orf50Q5SZB4 431 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 CPZQ66K79 652 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 MSANTD1Q6ZTZ1 278 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 C6orf120Q7Z4R8 191 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 TAF8Q7Z7C8 310 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 PARGQ86W56 976 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 ZZZ3Q8IYH5 903 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 SLC34A3Q8N130 599 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 TSACCQ96A04 125 aaPredicted RBP9.72□□□□□ -0.85
MCF2-209ENST00000520602 MARK1Q9P0L2 795 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 DAPK2Q9UIK4 370 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 GPR34Q9UPC5 381 aa9.72□□□□□ -0.85
MCF2-209ENST00000520602 A0A1B0GVG6 124 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 SLC1A7O00341 560 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 AP1G1O43747 822 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 GPR37L1O60883 481 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 SLC35G6P0C7Q6 338 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 OR12D1P0DN82 309 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 PIGAP37287 484 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 PBX2P40425 430 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 EXOC3L2Q2M3D2 409 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 RPS26P11Q5JNZ5 115 aaPredicted RBP9.71□□□□□ -0.85
MCF2-209ENST00000520602 DEPDC1Q5TB30 811 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 FAM83HQ6ZRV2 1179 aaPredicted RBP9.71□□□□□ -0.85
MCF2-209ENST00000520602 CLIP3Q96DZ5 547 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 CCDC115Q96NT0 180 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 ALPK1Q96QP1 1244 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 LGR4Q9BXB1 951 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 NPLQ9BXD5 320 aaPredicted RBP9.71□□□□□ -0.85
MCF2-209ENST00000520602 NAA50Q9GZZ1 169 aaKnown RBP9.71□□□□□ -0.85
MCF2-209ENST00000520602 DZANK1Q9NVP4 752 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 SCHIP1Q9P0W5 487 aaPredicted RBP9.71□□□□□ -0.85
MCF2-209ENST00000520602 ATP6V1HQ9UI12 483 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 ZNF232Q9UNY5 417 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 CA5BQ9Y2D0 317 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 VWA8A3KMH1 1905 aa9.71□□□□□ -0.85
MCF2-209ENST00000520602 ZNF860A6NHJ4 632 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 NME6O75414 186 aaPredicted RBP9.71□□□□□ -0.86
MCF2-209ENST00000520602 PCSK6P29122 969 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 RPS7P62081 194 aaKnown RBP9.71□□□□□ -0.86
MCF2-209ENST00000520602 NPRL3Q12980 569 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 SLAMF1Q13291 335 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 SLC14A1Q13336 389 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 IRF4Q15306 451 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 NKG7Q16617 165 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 COX20Q5RI15 118 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 SHQ1Q6PI26 577 aaKnown RBP9.71□□□□□ -0.86
MCF2-209ENST00000520602 CEP68Q76N32 757 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 MSRB3Q8IXL7 192 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 SLC5A8Q8N695 610 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 OR8J2Q8NGG1 315 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 OR52N2Q8NGI0 321 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 EHD1Q9H4M9 534 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 KCNK12Q9HB15 430 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 SLC23A2Q9UGH3 650 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 BTNL2Q9UIR0 455 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 LRRC72A6NJI9 287 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 INMTO95050 263 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 CCNYL3P0C7X3 344 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 PTNP21246 168 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 ZNF10P21506 573 aaPredicted RBP9.71□□□□□ -0.86
MCF2-209ENST00000520602 UQCRC2P22695 453 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 CPN2P22792 545 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 NTSR1P30989 418 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 INPP1P49441 399 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 RAB28P51157 221 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 SMIM11AP58511 58 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 STXBP1P61764 594 aaKnown RBP9.71□□□□□ -0.86
MCF2-209ENST00000520602 ID2Q02363 134 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 ZNF33BQ06732 778 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 C1DQ13901 141 aaKnown RBP9.71□□□□□ -0.86
MCF2-209ENST00000520602 C10orf62Q5T681 223 aaPredicted RBP9.71□□□□□ -0.86
MCF2-209ENST00000520602 ZNF852Q6ZMS4 543 aa9.71□□□□□ -0.86
MCF2-209ENST00000520602 MMP21Q8N119 569 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms