RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 LASP1Q14847 261 aaKnown RBP4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 FASTKD3Q14CZ7 662 aaKnown RBP4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 C2CD6Q53TS8 623 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 LCLAT1Q6UWP7 414 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 PRSS42Q7Z5A4 293 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 LPCAT1Q8NF37 534 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 OR10G7Q8NGN6 311 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 GPR148Q8TDV2 347 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 KRT35Q92764 455 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 ZDHHC6Q9H6R6 413 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 ZNF665Q9H7R5 613 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 TRPC4Q9UBN4 977 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 KLK11Q9UBX7 282 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 MRPS18CQ9Y3D5 142 aaKnown RBP4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 IGHV3-38A0A0C4DH36 116 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 NTN3O00634 580 aaPredicted RBP4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 B4GAT1O43505 415 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 DCXO43602 365 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 RTN2O75298 545 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 CGAP01215 116 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 NUDT17P0C025 328 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 SKILP12757 684 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 AOC1P19801 751 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 KIAA1024LP59773 190 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 C3AR1Q16581 482 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 IFI44LQ53G44 452 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 LYPLAL1Q5VWZ2 237 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 TMEM64Q6YI46 380 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 Q71RC1 249 aaPredicted RBP4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 ZFAND4Q86XD8 727 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 TMEM126BQ8IUX1 230 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 METTL4Q8N3J2 472 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 CARNMT1Q8N4J0 409 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 NAT8LQ8N9F0 302 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 CLEC1AQ8NC01 280 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 SPATA18Q8TC71 538 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 ZNF689Q96CS4 500 aaPredicted RBP4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 CABS1Q96KC9 395 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 UBAC1Q9BSL1 405 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 CABLES2Q9BTV7 478 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 PARLQ9H300 379 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 IL1RAPQ9NPH3 570 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 DNAJC11Q9NVH1 559 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 FBXW2Q9UKT8 454 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 RNF215Q9Y6U7 377 aa4.26□□□□□ -1.73
HMGCS1-207ENST00000514610 IGKV3D-15A0A087WSY6 115 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 ATP6AP2A0A1C7CYW4 349 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 TMEM129A0AVI4 362 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 CHUKO15111 745 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 TNFSF12O43508 249 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 SYT7O43581 403 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 SNAP91O60641 907 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 SORBS2O94875 1100 aaKnown RBP4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 STBD1O95210 358 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 HMOX1P09601 288 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 SMSP52788 366 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 NDST2P52849 883 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 UCP2P55851 309 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 RPS6KA1Q15418 735 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 STXBP2Q15833 593 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 TRIM65Q6PJ69 517 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 DOK6Q6PKX4 331 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 RFPL4BQ6ZWI9 263 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 NLRP14Q86W24 1093 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 CACUL1Q86Y37 369 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 UNC45BQ8IWX7 931 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 THEM5Q8N1Q8 247 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 MAPK1IP1LQ8NDC0 245 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 OR52B6Q8NGF0 335 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 ST7LQ8TDW4 575 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 AGAP3Q96P47 875 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 ERGIC2Q96RQ1 377 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 VGLL1Q99990 258 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 DDX50Q9BQ39 737 aaKnown RBP4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 NTMT1Q9BV86 223 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 LRRC2Q9BYS8 371 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 AKIRIN1Q9H9L7 192 aaPredicted RBP4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 MAGEF1Q9HAY2 307 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 MTRRQ9UBK8 725 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 SH3GLB1Q9Y371 365 aa4.25□□□□□ -1.73
HMGCS1-207ENST00000514610 A0A0J9YWU9 116 aa4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 SHISA7A6NL88 538 aa4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 TFECO14948 347 aaPredicted RBP4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 MTRF1O75570 445 aaKnown RBP4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 FGF19O95750 216 aa4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 ATP6V1B1P15313 513 aa4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 TNFSF10P50591 281 aa4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 ABCE1P61221 599 aaKnown RBP4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 ACTN3Q08043 901 aaPredicted RBP4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 KIAA0141Q14154 515 aaPredicted RBP4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 SPHARQ15513 63 aa4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 TAF1BQ53T94 588 aaPredicted RBP4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 ODF2Q5BJF6 829 aa4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 SERPINA12Q8IW75 414 aa4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 TRPV3Q8NET8 790 aa4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 MIPOL1Q8TD10 442 aa4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 C11orf52Q96A22 123 aa4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 ULK4Q96C45 1275 aa4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 LGMNQ99538 433 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms