RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 SLC35G5Q96KT7 338 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 NCBP2P52298 156 aaKnown RBP eCLIP12.66□□□□□ -0.38
TCOF1-213ENST00000514442 AP1S2P56377 157 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 GRB7Q14451 532 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 LAPTM4AQ15012 233 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 AGTRAPQ6RW13 159 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 TIGD4Q8IY51 512 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 CELF2-AS1Q8N7Q2 184 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 FAM83FQ8NEG4 500 aaPredicted RBP12.66□□□□□ -0.38
TCOF1-213ENST00000514442 UQCC2Q9BRT2 126 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 C1QTNF1Q9BXJ1 281 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 GPN3Q9UHW5 284 aaPredicted RBP12.66□□□□□ -0.38
TCOF1-213ENST00000514442 BACE2Q9Y5Z0 518 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 A0A0U1RQS6 177 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 TMX2-CTNND1H3BSU7 103 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 CA5AP35218 305 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 VIPR2P41587 438 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 PGDP52209 483 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 MEF2AQ02078 507 aaPredicted RBP12.66□□□□□ -0.38
TCOF1-213ENST00000514442 CSTF1Q05048 431 aaKnown RBP12.66□□□□□ -0.38
TCOF1-213ENST00000514442 LARS2Q15031 903 aaKnown RBP12.66□□□□□ -0.38
TCOF1-213ENST00000514442 PCBP2Q15366 365 aaKnown RBP eCLIP12.66□□□□□ -0.38
TCOF1-213ENST00000514442 FAM171BQ6P995 826 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 TAS1R1Q7RTX1 841 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 OR10G2Q8NGC3 310 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 OR8J3Q8NGG0 315 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 RBM18Q96H35 190 aaKnown RBP12.66□□□□□ -0.38
TCOF1-213ENST00000514442 BARD1Q99728 777 aaKnown RBP12.66□□□□□ -0.38
TCOF1-213ENST00000514442 CENPOQ9BU64 300 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 SLITRK2Q9H156 845 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 MAP10Q9P2G4 905 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 LRRC14BA6NHZ5 514 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 SLC6A4P31645 630 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 MAGEA6P43360 314 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 DIO3P55073 304 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 MBOAT1Q6ZNC8 495 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 CXXC5Q7LFL8 322 aaKnown RBP12.66□□□□□ -0.38
TCOF1-213ENST00000514442 GRAMD2AQ8IUY3 354 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 SLITRK4Q8IW52 837 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 IZUMO1Q8IYV9 350 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 KCNJ9Q92806 393 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 DPAGT1Q9H3H5 408 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 RANGRFQ9HD47 186 aaPredicted RBP12.66□□□□□ -0.38
TCOF1-213ENST00000514442 IL1RAPQ9NPH3 570 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 TMEM138Q9NPI0 162 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 ELOVL2Q9NXB9 296 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 BOLA1Q9Y3E2 137 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 HEBP2Q9Y5Z4 205 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 CLCA3PQ9Y6N3 262 aa12.66□□□□□ -0.38
TCOF1-213ENST00000514442 NDUFS4O43181 175 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 HOXC11O43248 304 aaPredicted RBP12.65□□□□□ -0.38
TCOF1-213ENST00000514442 ERI3O43414 337 aaKnown RBP12.65□□□□□ -0.38
TCOF1-213ENST00000514442 B3GALT2O43825 422 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 OPN1SWP03999 348 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 LCKP06239 509 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 DDOSTP39656 456 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 RPS5P46782 204 aaKnown RBP12.65□□□□□ -0.38
TCOF1-213ENST00000514442 RACK1P63244 317 aaKnown RBP12.65□□□□□ -0.38
TCOF1-213ENST00000514442 DCST1Q5T197 706 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 SLX4IPQ5VYV7 408 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 ASB18Q6ZVZ8 466 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 UFD1Q92890 307 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 CREB3L1Q96BA8 519 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 EFCAB11Q9BUY7 163 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 CHIAQ9BZP6 476 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 OR51B5Q9H339 312 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 FARSBQ9NSD9 589 aaKnown RBP12.65□□□□□ -0.38
TCOF1-213ENST00000514442 MED11Q9P086 117 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 SEC14L4Q9UDX3 406 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 POFUT2Q9Y2G5 429 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 DHRS7Q9Y394 339 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 PCDHGB3Q9Y5G1 929 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 A0A1B0GUL6 1792 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 CLDN4O14493 209 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 CHST10O43529 356 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 GABARAPO95166 117 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 CD70P32970 193 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 CDKN2DP55273 166 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 PRR5P85299 388 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 TMEM115Q12893 351 aaPredicted RBP12.65□□□□□ -0.38
TCOF1-213ENST00000514442 ADAM15Q13444 863 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 GANABQ14697 944 aaKnown RBP12.65□□□□□ -0.38
TCOF1-213ENST00000514442 TECRLQ5HYJ1 363 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 WACQ9BTA9 647 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 ADAP2Q9NPF8 381 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 CD93Q9NPY3 652 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 RPL36Q9Y3U8 105 aaKnown RBP12.65□□□□□ -0.38
TCOF1-213ENST00000514442 TNRC6CQ9HCJ0 1690 aaKnown RBP12.65□□□□□ -0.38
TCOF1-213ENST00000514442 CD68P34810 354 aaPredicted RBP12.65□□□□□ -0.38
TCOF1-213ENST00000514442 ZNF613Q6PF04 617 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 ARSKQ6UWY0 536 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 FAM220AQ7Z4H9 259 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 NRSN1Q8IZ57 195 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 OR4E2Q8NGC2 313 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 OR10Q1Q8NGQ4 319 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 C11orf16Q9NQ32 467 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 THUMPD1Q9NXG2 353 aaKnown RBP12.65□□□□□ -0.38
TCOF1-213ENST00000514442 COMMD9Q9P000 198 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 MID1O15344 667 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 S1PR4O95977 384 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms