RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 GJA5P36382 358 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 GPR17Q13304 367 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 SLC9A5Q14940 896 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 GPR19Q15760 415 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 PAMR1Q6UXH9 720 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 RNF111Q6ZNA4 994 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 SH2D5Q6ZV89 423 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 CFAP206Q8IYR0 622 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 NEIL3Q8TAT5 605 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 CMTM7Q96FZ5 175 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 AIF1LQ9BQI0 150 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 CRTAC1Q9NQ79 661 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 CUEDC1Q9NWM3 386 aaPredicted RBP10.84□□□□□ -0.67
TCOF1-211ENST00000513346 EXOSC1Q9Y3B2 195 aaKnown RBP10.84□□□□□ -0.67
TCOF1-211ENST00000513346 CHD4Q14839 1912 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 EVI2BP34910 448 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 CSKP41240 450 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 TAGLNQ01995 201 aaKnown RBP10.84□□□□□ -0.67
TCOF1-211ENST00000513346 OR4D1Q15615 310 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 TBCEQ15813 527 aaPredicted RBP10.84□□□□□ -0.67
TCOF1-211ENST00000513346 NTRK2Q16620 822 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 ZNF311Q5JNZ3 666 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 ARSKQ6UWY0 536 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 KRT77Q7Z794 578 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 RNF130Q86XS8 419 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 GALNT13Q8IUC8 556 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 TMEM130Q8N3G9 435 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 LINC00471Q8N535 108 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 C2orf73Q8N5S3 287 aaPredicted RBP10.84□□□□□ -0.67
TCOF1-211ENST00000513346 NETO1Q8TDF5 533 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 MCMBPQ9BTE3 642 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 ACTR6Q9GZN1 396 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 INIPQ9NRY2 104 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 DCAF13Q9NV06 445 aaKnown RBP10.84□□□□□ -0.67
TCOF1-211ENST00000513346 TNFRSF10DQ9UBN6 386 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 EDARQ9UNE0 448 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 GPR45Q9Y5Y3 372 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 LRRC72A6NJI9 287 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 J3KR12 359 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 PRKCGP05129 697 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 PIM1P11309 404 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 RPL4P36578 427 aaKnown RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 RGS6P49758 472 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 PNLIPRP1P54315 467 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 MLLT6P55198 1093 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 NDUFA9Q16795 377 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 NFKBIDQ8NI38 313 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 C1orf216Q8TAB5 229 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 SNX33Q8WV41 574 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 MRGPRX2Q96LB1 330 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 UHRF1Q96T88 793 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 MGME1Q9BQP7 344 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 ELAC1Q9H777 363 aaKnown RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 PCDHB16Q9NRJ7 776 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 CLDND1Q9NY35 253 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 GLS2Q9UI32 602 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 A0A0X1KG70 313 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 A0A1W2PRB8 838 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 SLC31A1O15431 190 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 HMGN1P05114 100 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 PCCBP05166 539 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 ALDOCP09972 364 aaKnown RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 FDXRP22570 491 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 UGT2B10P36537 528 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 RPL35P42766 123 aaKnown RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 CRISP1P54107 249 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 SEC13P55735 322 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 DSTNP60981 165 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 PITX1P78337 314 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 SOX4Q06945 474 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 ILF3Q12906 894 aaKnown RBP eCLIP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 ZNF630Q2M218 657 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 OAFQ86UD1 273 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 NXPE2Q96DL1 559 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 DUS3LQ96G46 650 aaKnown RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 C12orf66Q96MD2 445 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 FBXO8Q9NRD0 319 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 TAS2R3Q9NYW6 316 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 MRPS33Q9Y291 106 aaKnown RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 OR2AT4A6NND4 320 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 EEF1E1O43324 174 aaKnown RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 OR6A2O95222 327 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 CDK1P06493 297 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 BCKDHAP12694 445 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 PIK3CBP42338 1070 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 OR1E2P47887 323 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 KCNQ1P51787 676 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 RGS8P57771 180 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 EXOC3L2Q2M3D2 409 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 TNFAIP8L2Q6P589 184 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 ARL9Q6T311 187 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 VITQ6UXI7 678 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 TP53INP2Q8IXH6 220 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 UBQLNLQ8IYU4 475 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 SAMD12Q8N8I0 201 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 ACVR1CQ8NER5 493 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 OR8J1Q8NGP2 316 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 ZNF461Q8TAF7 563 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms