RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 BFSP1Q12934 665 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 ZNF239Q16600 458 aaKnown RBP4.36□□□□□ -1.71
CHD1-209ENST00000512844 SPINK14Q6IE38 97 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 KLHL10Q6JEL2 608 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 DND1Q8IYX4 353 aaKnown RBP4.36□□□□□ -1.71
CHD1-209ENST00000512844 SPEM1Q8N4L4 309 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 OTUD6BQ8N6M0 293 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 SMYD1Q8NB12 490 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 OR13C5Q8NGS8 318 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.36□□□□□ -1.71
CHD1-209ENST00000512844 CKAP2Q8WWK9 683 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 ATG101Q9BSB4 218 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 IDI2Q9BXS1 227 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 C5orf66Q9H5L9 145 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 MTRRQ9UBK8 725 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.36□□□□□ -1.71
CHD1-209ENST00000512844 ITM2BQ9Y287 266 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 NOTCH3Q9UM47 2321 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 NEDD4P46934 1319 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 MYO15BQ96JP2 1530 aa4.36□□□□□ -1.71
CHD1-209ENST00000512844 IGHV3-38A0A0C4DH36 116 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 TMCO5BA8MYB1 307 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 DLATP10515 647 aaKnown RBP4.35□□□□□ -1.71
CHD1-209ENST00000512844 GLULP15104 373 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 CD1DP15813 335 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 DESP17661 470 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 CCND3P30281 292 aaPredicted RBP4.35□□□□□ -1.71
CHD1-209ENST00000512844 COX10Q12887 443 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 MLF2Q15773 248 aaPredicted RBP4.35□□□□□ -1.71
CHD1-209ENST00000512844 KRT71Q3SY84 523 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 RFTN2Q52LD8 501 aaPredicted RBP4.35□□□□□ -1.71
CHD1-209ENST00000512844 DCLRE1AQ6PJP8 1040 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 C17orf107Q6ZR85 190 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 CCDC73Q6ZRK6 1079 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 GALNTL5Q7Z4T8 443 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 CCDC91Q7Z6B0 441 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 C5orf24Q7Z6I8 188 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 ZNF444Q8N0Y2 327 aaPredicted RBP4.35□□□□□ -1.71
CHD1-209ENST00000512844 SLC39A11Q8N1S5 342 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 CARNMT1Q8N4J0 409 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 TMEM99Q8N816 258 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 RNF149Q8NC42 400 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 SGF29Q96ES7 293 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 ANKRD27Q96NW4 1050 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 C17orf62Q9BQA9 187 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 MOB1AQ9H8S9 216 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 TMEM161AQ9NX61 479 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 THAP10Q9P2Z0 257 aaPredicted RBP4.35□□□□□ -1.71
CHD1-209ENST00000512844 RARRES3Q9UL19 164 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 MRPS18CQ9Y3D5 142 aaKnown RBP4.35□□□□□ -1.71
CHD1-209ENST00000512844 IKBKGQ9Y6K9 419 aa4.35□□□□□ -1.71
CHD1-209ENST00000512844 IGHV3-20A0A0C4DH32 117 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 CCDC162PA2VCL2 907 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 TRIM49BA6NDI0 452 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 TRIM64CA6NLI5 447 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 CTDSPLO15194 276 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 CLN5O75503 358 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 CRCPO75575 148 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 HPP00738 406 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 MUTP22033 750 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 GATA2P23769 480 aaPredicted RBP4.34□□□□□ -1.71
CHD1-209ENST00000512844 EDNRAP25101 427 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 IER3P46695 156 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 CRYBA2P53672 197 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 NDUFV3P56181 108 aaKnown RBP4.34□□□□□ -1.71
CHD1-209ENST00000512844 KRTAP10-5P60370 271 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 AKAP17AQ02040 695 aaKnown RBP4.34□□□□□ -1.71
CHD1-209ENST00000512844 PEX6Q13608 980 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 ECSCRQ19T08 205 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 DNAJC21Q5F1R6 531 aaKnown RBP4.34□□□□□ -1.71
CHD1-209ENST00000512844 ZNF774Q6NX45 483 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 CATSPER4Q7RTX7 472 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 SPAG16Q8N0X2 631 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 NHLRC2Q8NBF2 726 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 OR8H1Q8NGG4 311 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 ZNF274Q96GC6 653 aaPredicted RBP4.34□□□□□ -1.71
CHD1-209ENST00000512844 OCR1Q9BZK8 76 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 VIPAS39Q9H9C1 493 aa4.34□□□□□ -1.71
CHD1-209ENST00000512844 GPRASP1Q5JY77 1395 aa4.33□□□□□ -1.72
CHD1-209ENST00000512844 PFASO15067 1338 aa4.33□□□□□ -1.72
CHD1-209ENST00000512844 OOEPA6NGQ2 149 aa4.33□□□□□ -1.72
CHD1-209ENST00000512844 ZNF732B4DXR9 585 aa4.33□□□□□ -1.72
CHD1-209ENST00000512844 C19orf81C9J6K1 198 aa4.33□□□□□ -1.72
CHD1-209ENST00000512844 ZNF749O43361 778 aa4.33□□□□□ -1.72
CHD1-209ENST00000512844 HOXD4P09016 255 aaPredicted RBP4.33□□□□□ -1.72
CHD1-209ENST00000512844 ITIH1P19827 911 aa4.33□□□□□ -1.72
CHD1-209ENST00000512844 SLC10A5Q5PT55 438 aa4.33□□□□□ -1.72
CHD1-209ENST00000512844 ALKBH5Q6P6C2 394 aaKnown RBP4.33□□□□□ -1.72
CHD1-209ENST00000512844 RAPH1Q70E73 1250 aa4.33□□□□□ -1.72
CHD1-209ENST00000512844 TMUB2Q71RG4 321 aa4.33□□□□□ -1.72
CHD1-209ENST00000512844 MCM10Q7L590 875 aa4.33□□□□□ -1.72
CHD1-209ENST00000512844 PHC2Q8IXK0 858 aa4.33□□□□□ -1.72
CHD1-209ENST00000512844 ZC3H3Q8IXZ2 948 aaKnown RBP4.33□□□□□ -1.72
CHD1-209ENST00000512844 SLC43A2Q8N370 569 aa4.33□□□□□ -1.72
CHD1-209ENST00000512844 SEPT8Q92599 483 aa4.33□□□□□ -1.72
CHD1-209ENST00000512844 N4BP2L2Q92802 583 aaPredicted RBP4.33□□□□□ -1.72
CHD1-209ENST00000512844 CORO2AQ92828 525 aa4.33□□□□□ -1.72
CHD1-209ENST00000512844 BPIFA2Q96DR5 249 aa4.33□□□□□ -1.72
CHD1-209ENST00000512844 TRIM44Q96DX7 344 aaPredicted RBP4.33□□□□□ -1.72
CHD1-209ENST00000512844 CFAP53Q96M91 514 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms