RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 TACR1P25103 407 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 PCSK6P29122 969 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 HNF4AP41235 474 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 DNASE1L1P49184 302 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 HNRNPFP52597 415 aaKnown RBP17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 TIAL1Q01085 375 aaKnown RBP eCLIP17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 PWP1Q13610 501 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 NEPROQ6NW34 567 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 LCTLQ6UWM7 567 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 RGS9BPQ6ZS82 235 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 SCUBE1Q8IWY4 988 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 CA13Q8N1Q1 262 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 FAM109AQ8N4B1 249 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 TMEM52Q8NDY8 209 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 NT5CQ8TCD5 201 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 PYCR2Q96C36 320 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 VMP1Q96GC9 406 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 SMIM10Q96HG1 83 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 RASL10BQ96S79 203 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 PCBD2Q9H0N5 130 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 ALKBH4Q9NXW9 302 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 PAK5Q9P286 719 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 KLHL42Q9P2K6 505 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 EDARQ9UNE0 448 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 EPN1Q9Y6I3 576 aaPredicted RBP17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 NINQ8N4C6 2090 aa17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 WWP2O00308 870 aa17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 AVILO75366 819 aa17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 RNH1P13489 461 aaKnown RBP17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 ENO3P13929 434 aaPredicted RBP17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 CYLC1P35663 651 aaPredicted RBP17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 CTBP1Q13363 440 aa17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 PHKG1Q16816 387 aa17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 CATSPEREQ5SY80 951 aa17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 ZNF470Q6ECI4 717 aa17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 UBL4BQ8N7F7 174 aa17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 ANKRD53Q8N9V6 530 aa17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 ASB15Q8WXK1 588 aa17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 KCNJ9Q92806 393 aa17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 SCYL1Q96KG9 808 aa17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 CALR3Q96L12 384 aaKnown RBP17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 AARSD1Q9BTE6 412 aaKnown RBP17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 IL1RL2Q9HB29 575 aa17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 INTS10Q9NVR2 710 aaKnown RBP17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 TUBA8Q9NY65 449 aaPredicted RBP17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 ADAM21Q9UKJ8 722 aa17.6■□□□□ 0.41
HMGCS1-206ENST00000511774 TRBC2A0A5B9 178 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 SUSD5O60279 629 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 CNR1P21554 472 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 BMP5P22003 454 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 GRK3P35626 688 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 MAN2A2P49641 1150 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 DCAF7P61962 342 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 TERF2Q15554 542 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 NDUFAF5Q5TEU4 345 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 RAD9BQ6WBX8 426 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 CXorf67Q86X51 503 aaPredicted RBP17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 VWA5B2Q8N398 1253 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 ZNF321PQ8N8H1 164 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 SPATA3Q8NHX4 192 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 RNASE6Q93091 150 aaKnown RBP17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 KIAA1191Q96A73 305 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 HES6Q96HZ4 224 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 CAPZA3Q96KX2 299 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 FAM173AQ9BQD7 235 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 ZNF395Q9H8N7 513 aaPredicted RBP17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 MYOTQ9UBF9 498 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 B4GALT7Q9UBV7 327 aa17.59■□□□□ 0.41
HMGCS1-206ENST00000511774 MYOCOSA0A1B0GUC4 107 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 MIF4GDA9UHW6 222 aaKnown RBP17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 PFDN6O15212 129 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 ZFAND5O76080 213 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 CCL3P10147 92 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 SCTRP47872 440 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 ASCL1P50553 236 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 CCR8P51685 355 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 NKX6-1P78426 367 aaPredicted RBP17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 BASP1P80723 227 aaKnown RBP17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 HYAL4Q2M3T9 481 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 FBXL19-AS1Q494R0 122 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 WLSQ5T9L3 541 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 GK5Q6ZS86 529 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 ABHD13Q7L211 337 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 GPALPP1Q8IXQ4 340 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 CCDC89Q8N998 374 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 TNIP2Q8NFZ5 429 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 LINC01560Q8TB33 94 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 EEF1AKMT1Q8WVE0 214 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 COX4I2Q96KJ9 171 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 NEUROD4Q9HD90 331 aa17.58■□□□□ 0.4
HMGCS1-206ENST00000511774 PSMD12O00232 456 aaPredicted RBP17.57■□□□□ 0.4
HMGCS1-206ENST00000511774 RFPL3SP0C7P2 107 aa17.57■□□□□ 0.4
HMGCS1-206ENST00000511774 HK2P52789 917 aa17.57■□□□□ 0.4
HMGCS1-206ENST00000511774 RGS1Q08116 209 aa17.57■□□□□ 0.4
HMGCS1-206ENST00000511774 RUNX2Q13950 521 aa17.57■□□□□ 0.4
HMGCS1-206ENST00000511774 SIX1Q15475 284 aaPredicted RBP17.57■□□□□ 0.4
HMGCS1-206ENST00000511774 HECTD2Q5U5R9 776 aa17.57■□□□□ 0.4
HMGCS1-206ENST00000511774 ADGRD1Q6QNK2 874 aa17.57■□□□□ 0.4
HMGCS1-206ENST00000511774 STRA8Q7Z7C7 330 aa17.57■□□□□ 0.4
HMGCS1-206ENST00000511774 ULK2Q8IYT8 1036 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms