RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 ANHXE9PGG2 379 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 TLR4O00206 839 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 CACNB4O00305 520 aaPredicted RBP2.7□□□□□ -1.98
CHD1-207ENST00000511628 PSMD3O43242 534 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 ZFAND5O76080 213 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 DUS4LO95620 317 aaKnown RBP2.7□□□□□ -1.98
CHD1-207ENST00000511628 ABHD2P08910 425 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 KRT3P12035 628 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 ACADSP16219 412 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 UGT1A6P19224 532 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 OR3A3P47888 321 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 NOVP48745 357 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 NT5C2P49902 561 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 SLC12A3P55017 1021 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 PAX9P55771 341 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 GUCY2DQ02846 1103 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 GFPT1Q06210 699 aaPredicted RBP2.7□□□□□ -1.98
CHD1-207ENST00000511628 SLC3A1Q07837 685 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 MSLNQ13421 630 aaPredicted RBP2.7□□□□□ -1.98
CHD1-207ENST00000511628 GPR50Q13585 617 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 EFTUD2Q15029 972 aaKnown RBP eCLIP2.7□□□□□ -1.98
CHD1-207ENST00000511628 PPA1Q15181 289 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 MAPK11Q15759 364 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 STXBP2Q15833 593 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 EPC2Q52LR7 807 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 SLC27A4Q6P1M0 643 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 RABEPKQ7Z6M1 372 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 THEM5Q8N1Q8 247 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 RTL3Q8N8U3 475 aaKnown RBP2.7□□□□□ -1.98
CHD1-207ENST00000511628 OR8H1Q8NGG4 311 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 GPR148Q8TDV2 347 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 SMPDL3AQ92484 453 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 ATP6V0A1Q93050 837 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 DTD2Q96FN9 168 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 GAL3ST4Q96RP7 486 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 USP28Q96RU2 1077 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 TDRD1Q9BXT4 1180 aaKnown RBP2.7□□□□□ -1.98
CHD1-207ENST00000511628 NYXQ9GZU5 481 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 WWTR1Q9GZV5 400 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 ZDHHC6Q9H6R6 413 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 SLC7A10Q9NS82 523 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 FAM212BQ9NTI7 297 aaPredicted RBP2.7□□□□□ -1.98
CHD1-207ENST00000511628 EXOC1Q9NV70 894 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 MAD2L2Q9UI95 211 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 PILRAQ9UKJ1 303 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 PPP1R3CQ9UQK1 317 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 FOXA2Q9Y261 457 aaPredicted RBP2.7□□□□□ -1.98
CHD1-207ENST00000511628 DHX29Q7Z478 1369 aaKnown RBP2.7□□□□□ -1.98
CHD1-207ENST00000511628 NPHP3Q7Z494 1330 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 IGKV6D-41A0A0C4DH26 115 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 FAM149AA5PLN7 773 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 C15orf61A6NNL5 157 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 KPNA7A9QM74 516 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 LMO7DNF2Z398 122 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 M0R296 226 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 CHUKO15111 745 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 TLX2O43763 284 aaPredicted RBP2.69□□□□□ -1.98
CHD1-207ENST00000511628 ZBTB14O43829 449 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 MAGEC1O60732 1142 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 SKILP12757 684 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 EZRP15311 586 aaKnown RBP2.69□□□□□ -1.98
CHD1-207ENST00000511628 CSRP3P50461 194 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 TNFSF10P50591 281 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 CASP9P55211 416 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 DSCR10P59022 87 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 LMO4P61968 165 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 SGCGQ13326 291 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 RAPSNQ13702 412 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 GRB14Q14449 540 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 TAB1Q15750 504 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 FAM106AQ4KMX7 169 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 SPANXN4Q5MJ08 99 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 ATP1A1-AS1Q5TC04 95 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 ZNF776Q68DI1 518 aaPredicted RBP2.69□□□□□ -1.98
CHD1-207ENST00000511628 ZNF613Q6PF04 617 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 C15orf52Q6ZUT6 534 aaKnown RBP2.69□□□□□ -1.98
CHD1-207ENST00000511628 STHQ8IWL8 128 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 DND1Q8IYX4 353 aaKnown RBP2.69□□□□□ -1.98
CHD1-207ENST00000511628 ZNF619Q8N2I2 560 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 TMEM99Q8N816 258 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 TRPV3Q8NET8 790 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 NEK11Q8NG66 645 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 OR52E1Q8NGJ3 308 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 SPATA18Q8TC71 538 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 URGCPQ8TCY9 931 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 HAS2Q92819 552 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 CASP10Q92851 521 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 ZNF560Q96MR9 790 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 ZNF300Q96RE9 604 aaPredicted RBP2.69□□□□□ -1.98
CHD1-207ENST00000511628 NACAP1Q9BZK3 213 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 TSPYL1Q9H0U9 437 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 CARD9Q9H257 536 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 MTIF3Q9H2K0 278 aaKnown RBP2.69□□□□□ -1.98
CHD1-207ENST00000511628 DPEP3Q9H4B8 488 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 FNDC4Q9H6D8 234 aaPredicted RBP2.69□□□□□ -1.98
CHD1-207ENST00000511628 ZNF665Q9H7R5 613 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 KCNMB3Q9NPA1 279 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 PRMT8Q9NR22 394 aaPredicted RBP2.69□□□□□ -1.98
CHD1-207ENST00000511628 MIS18AQ9NYP9 233 aa2.69□□□□□ -1.98
CHD1-207ENST00000511628 TRMT6Q9UJA5 497 aaKnown RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms