RNA–Protein interactions for RNA: ENST00000504465.5

CAST-213, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-213ENST00000504465 PUM1Q14671 1186 aaKnown RBP eCLIP8.59□□□□□ -1.032e-7■■■□□ 16.5
CAST-213ENST00000504465 GANABQ14697 944 aaKnown RBP8.59□□□□□ -1.03
CAST-213ENST00000504465 FRMPD2BQ6IN97 320 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 MED27Q6P2C8 311 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 WDR53Q7Z5U6 358 aaPredicted RBP8.59□□□□□ -1.03
CAST-213ENST00000504465 TMC8Q8IU68 726 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 RAVER1Q8IY67 606 aaKnown RBP8.59□□□□□ -1.03
CAST-213ENST00000504465 CLIP4Q8N3C7 705 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 AQP11Q8NBQ7 271 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 OR5AK3PQ8NH89 298 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 C9orf43Q8TAL5 461 aaPredicted RBP8.59□□□□□ -1.03
CAST-213ENST00000504465 C16orf78Q8WTQ4 265 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 APOBEC4Q8WW27 367 aaKnown RBP8.59□□□□□ -1.03
CAST-213ENST00000504465 GEMIN6Q8WXD5 167 aaKnown RBP8.59□□□□□ -1.03
CAST-213ENST00000504465 OPALINQ96PE5 141 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 KCNS3Q9BQ31 491 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 WRAP53Q9BUR4 548 aaKnown RBP8.59□□□□□ -1.03
CAST-213ENST00000504465 YIPF2Q9BWQ6 316 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 HHATLQ9HCP6 504 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 IMPAD1Q9NX62 359 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 CNOT2Q9NZN8 540 aaKnown RBP8.59□□□□□ -1.03
CAST-213ENST00000504465 RHCGQ9UBD6 479 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 GULP1Q9UBP9 304 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 SRRDQ9UH36 339 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 OGDHLQ9ULD0 1010 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 TBC1D24Q9ULP9 559 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 LSM2Q9Y333 95 aaKnown RBP8.59□□□□□ -1.03
CAST-213ENST00000504465 NUP214P35658 2090 aaPredicted RBP8.59□□□□□ -1.03
CAST-213ENST00000504465 DSPPQ9NZW4 1301 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 A0A075B6Q4 140 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 TRBC2A0A5B9 178 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 FAM227AF5H4B4 570 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 ASNA1O43681 348 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 CATP04040 527 aaKnown RBP8.59□□□□□ -1.03
CAST-213ENST00000504465 EIF2S1P05198 315 aaKnown RBP8.59□□□□□ -1.03
CAST-213ENST00000504465 ARAFP10398 606 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 TIMP2P16035 220 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 ZNF30P17039 623 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 PRIM2P49643 509 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 DGKEP52429 567 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 OLR1P78380 273 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 DUSP7Q16829 419 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 PLAG1Q6DJT9 500 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 TMPRSS11BQ86T26 416 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 TMEM25Q86YD3 366 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 LAS2Q8IYD9 372 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 MMP21Q8N119 569 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 SLC39A11Q8N1S5 342 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 TRAM1L1Q8N609 369 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 PSD4Q8NDX1 1056 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 ZNF480Q8WV37 535 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 BTN2A2Q8WVV5 523 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 TP53INP1Q96A56 240 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 WDR34Q96EX3 536 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 ZNF486Q96H40 463 aaPredicted RBP8.59□□□□□ -1.03
CAST-213ENST00000504465 YME1L1Q96TA2 773 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 MAPKAP1Q9BPZ7 522 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 BARHL1Q9BZE3 327 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 ROGDIQ9GZN7 287 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 SPNS1Q9H2V7 528 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 OR51B5Q9H339 312 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 ZNF556Q9HAH1 456 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 NMNAT1Q9HAN9 279 aaPredicted RBP8.59□□□□□ -1.03
CAST-213ENST00000504465 C14orf119Q9NWQ9 140 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 REV1Q9UBZ9 1251 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 KCND3Q9UK17 655 aa8.59□□□□□ -1.03
CAST-213ENST00000504465 COL4A6Q14031 1691 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 ARRDC5A6NEK1 342 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 TTC36A6NLP5 189 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 LOC110117498-PIK3R3F6TDL0 507 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 FOXE1O00358 373 aaPredicted RBP8.58□□□□□ -1.04
CAST-213ENST00000504465 CCRL2O00421 344 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 PITPNM1O00562 1244 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 GRM6O15303 877 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 SEMA7AO75326 666 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 ENTPD6O75354 484 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 GADD45GO95257 159 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 C1orf105O95561 183 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 TGFB1P01137 390 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 CXCL10P02778 98 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 IGFBP1P08833 259 aaPredicted RBP8.58□□□□□ -1.04
CAST-213ENST00000504465 PTPN2P17706 415 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 RHCEP18577 417 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 TNFSF8P32971 234 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 PRLHRP49683 370 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 LIM2P55344 173 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 CCL23P55773 120 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 CDC42P60953 191 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 C2orf80Q0P641 193 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 FOXD4Q12950 439 aaPredicted RBP8.58□□□□□ -1.04
CAST-213ENST00000504465 SLBPQ14493 270 aaKnown RBP eCLIP8.58□□□□□ -1.04
CAST-213ENST00000504465 MED22Q15528 200 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 ZNF630Q2M218 657 aaPredicted RBP8.58□□□□□ -1.04
CAST-213ENST00000504465 AGAP6Q5VW22 663 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 PTCHD4Q6ZW05 846 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 TECPR1Q7Z6L1 1165 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 OXR1Q8N573 874 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 PIK3R3Q92569 461 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 TMEM159Q96B96 161 aa8.58□□□□□ -1.04
CAST-213ENST00000504465 TRMT61AQ96FX7 289 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms