RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 C4orf19Q8IY42 314 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 CCDC89Q8N998 374 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 ERO1AQ96HE7 468 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 TRIM7Q9C029 511 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 STRADBQ9C0K7 418 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 LMAN1LQ9HAT1 526 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 CLIC5Q9NZA1 410 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 NFKBIL1Q9UBC1 381 aaPredicted RBP2.67□□□□□ -1.98
SMC4-227ENST00000497984 POGZQ7Z3K3 1410 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 FAM205AQ6ZU69 1335 aa2.67□□□□□ -1.98
SMC4-227ENST00000497984 C5orf52A6NGY3 159 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 PRSS46E5RG02 174 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 E9PAM4 449 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 LMO7DNF2Z398 122 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 PGRMC2O15173 223 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 SIGLEC5O15389 551 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 PPIP5K2O43314 1243 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 QDPRP09417 244 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 CHRNA3P32297 505 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 RPL9P32969 192 aaKnown RBP2.66□□□□□ -1.98
SMC4-227ENST00000497984 ELK3P41970 407 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 RPP38P78345 283 aaKnown RBP2.66□□□□□ -1.98
SMC4-227ENST00000497984 ZNF542PQ5EBM4 170 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 ZRANB3Q5FWF4 1079 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 FAM46CQ5VWP2 391 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 MEX3DQ86XN8 651 aaKnown RBP2.66□□□□□ -1.98
SMC4-227ENST00000497984 TMEM99Q8N816 258 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 OR4Q3Q8NH05 313 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 HEXDCQ8WVB3 486 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 BAG1Q99933 345 aaPredicted RBP2.66□□□□□ -1.98
SMC4-227ENST00000497984 FERMT1Q9BQL6 677 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 PINK1Q9BXM7 581 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 SLC39A8Q9C0K1 460 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 C5orf66Q9H5L9 145 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 PDFQ9HBH1 243 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 IL1RAPQ9NPH3 570 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 DBF4Q9UBU7 674 aaPredicted RBP2.66□□□□□ -1.98
SMC4-227ENST00000497984 ANAPC5Q9UJX4 755 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 AUP1Q9Y679 476 aa2.66□□□□□ -1.98
SMC4-227ENST00000497984 TRGV8A0A0C4DH27 118 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 C2orf92A0A1B0GVN3 265 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 E5RGE8 158 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 TXNL1O43396 289 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 SCO2O43819 266 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 EIF5BO60841 1220 aaKnown RBP2.65□□□□□ -1.99
SMC4-227ENST00000497984 VENTXO95231 258 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 FGF19O95750 216 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 IGHG1P01857 330 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 GBAP04062 536 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 VIMP08670 466 aaKnown RBP2.65□□□□□ -1.99
SMC4-227ENST00000497984 PDGFRAP16234 1089 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 CAPZA1P52907 286 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 ACY1Q03154 408 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 C2orf83Q53S99 150 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.65□□□□□ -1.991e-13■■■■■ 65.9
SMC4-227ENST00000497984 ZNF770Q6IQ21 691 aaPredicted RBP2.65□□□□□ -1.99
SMC4-227ENST00000497984 SPATA21Q7Z572 469 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 C5orf24Q7Z6I8 188 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 RADILQ96JH8 1075 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 TAAR6Q96RI8 345 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 APOL2Q9BQE5 337 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 CENPOQ9BU64 300 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 FAM129AQ9BZQ8 928 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 DPEP2Q9H4A9 486 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 PDRG1Q9NUG6 133 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 THYN1Q9P016 225 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 NOCTQ9UK39 431 aaKnown RBP2.65□□□□□ -1.99
SMC4-227ENST00000497984 SPATA2Q9UM82 520 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 NSG2Q9Y328 171 aa2.65□□□□□ -1.99
SMC4-227ENST00000497984 RPL37AP8A6NKH3 93 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 H7C0S8 307 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 ANGPTL1O95841 491 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 RPN1P04843 607 aaKnown RBP2.64□□□□□ -1.99
SMC4-227ENST00000497984 GIG44P09565 113 aaPredicted RBP2.64□□□□□ -1.99
SMC4-227ENST00000497984 SP9P0CG40 484 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 CRKLP46109 303 aaKnown RBP2.64□□□□□ -1.99
SMC4-227ENST00000497984 RPL34P49207 117 aaKnown RBP2.64□□□□□ -1.99
SMC4-227ENST00000497984 PTENP60484 403 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 IGLV3-21P80748 117 aaPredicted RBP2.64□□□□□ -1.99
SMC4-227ENST00000497984 CNTN1Q12860 1018 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 KNOP1Q1ED39 458 aaKnown RBP2.64□□□□□ -1.99
SMC4-227ENST00000497984 POM121L1PQ3SYA9 428 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 LRRC37A5PQ49AS3 106 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 RFTN2Q52LD8 501 aaPredicted RBP2.64□□□□□ -1.99
SMC4-227ENST00000497984 ARMCX4Q5H9R4 360 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 TEX35Q5T0J7 233 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 LINC00242Q5T6M2 205 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 PLPP4Q5VZY2 271 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 SLC27A4Q6P1M0 643 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 RPAINQ86UA6 219 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 SERINC5Q86VE9 423 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 DZIP1Q86YF9 867 aaKnown RBP2.64□□□□□ -1.99
SMC4-227ENST00000497984 LRRC49Q8IUZ0 686 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 NME8Q8N427 588 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 OR6F1Q8NGZ6 308 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 RIT1Q92963 219 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 NABP1Q96AH0 204 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 ZNF285Q96NJ3 590 aa2.64□□□□□ -1.99
SMC4-227ENST00000497984 ALKBH3Q96Q83 286 aaPredicted RBP2.64□□□□□ -1.99
SMC4-227ENST00000497984 EDEM3Q9BZQ6 932 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms