RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 MAP1AP78559 2803 aaPredicted RBP12.72□□□□□ -0.37
SAMM50-204ENST00000493161 ZNF407Q9C0G0 2248 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 A0A0G2JNJ9 132 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 BANF1O75531 89 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 AHSGP02765 367 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 CELA3AP09093 270 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 GLI4P10075 376 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 KLK2P20151 261 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 ACVR2AP27037 513 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 ADH7P40394 386 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 SOX3P41225 446 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 BTN3A2P78410 334 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 PLGLB1Q02325 96 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 RBBP5Q15291 538 aaKnown RBP12.72□□□□□ -0.37
SAMM50-204ENST00000493161 ZNF750Q32MQ0 723 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 NIPAL1Q6NVV3 410 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 ZNF585AQ6P3V2 769 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 ACAD11Q709F0 780 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 CLNKQ7Z7G1 428 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 VMP1Q96GC9 406 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 FOXC2Q99958 501 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 TTTY12Q9BZ98 90 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 CLK4Q9HAZ1 481 aaKnown RBP12.72□□□□□ -0.37
SAMM50-204ENST00000493161 LZTFL1Q9NQ48 299 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 ZNF358Q9NW07 568 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 DNAJB12Q9NXW2 375 aaKnown RBP12.72□□□□□ -0.37
SAMM50-204ENST00000493161 Q9UFV3 132 aa12.72□□□□□ -0.37
SAMM50-204ENST00000493161 YARS2Q9Y2Z4 477 aaKnown RBP12.72□□□□□ -0.37
SAMM50-204ENST00000493161 A8MVJ9 347 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 WWP2O00308 870 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 ZNF354AO60765 605 aaPredicted RBP12.71□□□□□ -0.37
SAMM50-204ENST00000493161 CTAG2O75638 210 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 GLSO94925 669 aaPredicted RBP12.71□□□□□ -0.37
SAMM50-204ENST00000493161 HNRNPH1P31943 449 aaKnown RBP12.71□□□□□ -0.37
SAMM50-204ENST00000493161 MAGEA5P43359 124 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 CRYMQ14894 314 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 TERF2Q15554 542 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 CEBPEQ15744 281 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 HECTD2Q5U5R9 776 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 NXPE4Q6UWF7 544 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 TMPRSS11BQ86T26 416 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 THOC6Q86W42 341 aaKnown RBP12.71□□□□□ -0.37
SAMM50-204ENST00000493161 ZZZ3Q8IYH5 903 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 CLYBLQ8N0X4 340 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 TBC1D19Q8N5T2 526 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 ZNF321PQ8N8H1 164 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 NAT8LQ8N9F0 302 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 ARMC2Q8NEN0 867 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 TRPV3Q8NET8 790 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 PWWP2AQ96N64 755 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 RASL10BQ96S79 203 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 SMC6Q96SB8 1091 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 CNPPD1Q9BV87 410 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 PELI2Q9HAT8 420 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 HOMER3Q9NSC5 361 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 HPF1Q9NWY4 346 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 MMACHCQ9Y4U1 282 aa12.71□□□□□ -0.37
SAMM50-204ENST00000493161 FAM221AA4D161 298 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 NRDCO43847 1150 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 ZFAND5O76080 213 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 IGHG3P01860 377 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 SERPINA6P08185 405 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 SAT1P21673 171 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 AP1S2P56377 157 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 IL2P60568 153 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 C18orf21Q32NC0 220 aaPredicted RBP12.7□□□□□ -0.38
SAMM50-204ENST00000493161 PAOXQ6QHF9 649 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 SBSNQ6UWP8 590 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 TRILQ7L0X0 811 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 GAS2L3Q86XJ1 694 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.7□□□□□ -0.38
SAMM50-204ENST00000493161 TMEM251Q8N6I4 163 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 FAM47BQ8NA70 645 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 ASB15Q8WXK1 588 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 SLCO2A1Q92959 643 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 MAGOHBQ96A72 148 aaKnown RBP12.7□□□□□ -0.38
SAMM50-204ENST00000493161 MS4A14Q96JA4 679 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 SCYL1Q96KG9 808 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 GPATCH1Q9BRR8 931 aaKnown RBP12.7□□□□□ -0.38
SAMM50-204ENST00000493161 POLDIP3Q9BY77 421 aaKnown RBP12.7□□□□□ -0.38
SAMM50-204ENST00000493161 PLAC1Q9HBJ0 212 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 SEMA4BQ9NPR2 832 aaPredicted RBP12.7□□□□□ -0.38
SAMM50-204ENST00000493161 PRTFDC1Q9NRG1 225 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 MYOTQ9UBF9 498 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 ST6GALNAC2Q9UJ37 374 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 SLC22A14Q9Y267 594 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 DYRK1BQ9Y463 629 aa12.7□□□□□ -0.38
SAMM50-204ENST00000493161 ACANP16112 2415 aa12.69□□□□□ -0.38
SAMM50-204ENST00000493161 A0A1B0GVC2 190 aa12.69□□□□□ -0.38
SAMM50-204ENST00000493161 URADA6NGE7 173 aa12.69□□□□□ -0.38
SAMM50-204ENST00000493161 CCDC175P0C221 793 aa12.69□□□□□ -0.38
SAMM50-204ENST00000493161 PGAM1P18669 254 aa12.69□□□□□ -0.38
SAMM50-204ENST00000493161 ZFP36L2P47974 494 aaKnown RBP12.69□□□□□ -0.38
SAMM50-204ENST00000493161 DNASE1L1P49184 302 aa12.69□□□□□ -0.38
SAMM50-204ENST00000493161 CCZ1BP86790 482 aa12.69□□□□□ -0.38
SAMM50-204ENST00000493161 CCZ1P86791 482 aaPredicted RBP12.69□□□□□ -0.38
SAMM50-204ENST00000493161 FOLH1Q04609 750 aa12.69□□□□□ -0.38
SAMM50-204ENST00000493161 FOXO1Q12778 655 aa12.69□□□□□ -0.38
SAMM50-204ENST00000493161 FOXD4Q12950 439 aaPredicted RBP12.69□□□□□ -0.38
SAMM50-204ENST00000493161 SLC13A2Q13183 592 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms