RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 RELL1Q8IUW5 271 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 ZNF321PQ8N8H1 164 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 OR2L5Q8NG80 312 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 KCTD4Q8WVF5 259 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 ITLN2Q8WWU7 325 aaPredicted RBP11.04□□□□□ -0.64
SRSF4-204ENST00000489898 METTL21AQ8WXB1 218 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 SEC16BQ96JE7 1060 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 LPAR4Q99677 370 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 EGFL8Q99944 293 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 LRRC1Q9BTT6 524 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 TRIM54Q9BYV2 358 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 ALG9Q9H6U8 611 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 CLK4Q9HAZ1 481 aaKnown RBP11.04□□□□□ -0.64
SRSF4-204ENST00000489898 PRDM9Q9NQV7 894 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 DNAJC11Q9NVH1 559 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 NUDT4Q9NZJ9 180 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 DAPP1Q9UN19 280 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 ZNF835Q9Y2P0 537 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 MMACHCQ9Y4U1 282 aa11.04□□□□□ -0.64
SRSF4-204ENST00000489898 A0A0G2JMM0 328 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 A0A1B0GTL3 188 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 A0A1W2PPB8 328 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 A0A1W2PRS3 328 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 KIR3DP1A8MWS1 328 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 RTCAO00442 366 aaKnown RBP11.03□□□□□ -0.64
SRSF4-204ENST00000489898 NME2P1O60361 137 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 ETHE1O95571 254 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 SERPIND1P05546 499 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 ICAM2P13598 275 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 PRF1P14222 555 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 NME2P22392 152 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 JAK1P23458 1154 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 GSTM2P28161 218 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 GRNP28799 593 aaKnown RBP11.03□□□□□ -0.64
SRSF4-204ENST00000489898 LIM2P55344 173 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 RAB38P57729 211 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 OR4D2P58180 307 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 ATP6V0D1P61421 351 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 IGLV3-21P80748 117 aaPredicted RBP11.03□□□□□ -0.64
SRSF4-204ENST00000489898 PDK4Q16654 411 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 TECRLQ5HYJ1 363 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 ABHD17BQ5VST6 288 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 SPINK14Q6IE38 97 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 SULT1C3Q6IMI6 304 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 ADGRD1Q6QNK2 874 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 C16orf47Q6ZP98 133 aaPredicted RBP11.03□□□□□ -0.64
SRSF4-204ENST00000489898 Q6ZPB1 254 aaPredicted RBP11.03□□□□□ -0.64
SRSF4-204ENST00000489898 NCCRP1Q6ZVX7 275 aaPredicted RBP11.03□□□□□ -0.64
SRSF4-204ENST00000489898 FRA10AC1Q70Z53 315 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 LRRC70Q7Z2Q7 622 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 MAATS1Q7Z4T9 603 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 GPSM1Q86YR5 675 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 TICAM1Q8IUC6 712 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 PLD6Q8N2A8 252 aaKnown RBP11.03□□□□□ -0.64
SRSF4-204ENST00000489898 PPM1NQ8N819 430 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 FAM47BQ8NA70 645 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 NXNL1Q96CM4 212 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 PTCD3Q96EY7 689 aaKnown RBP11.03□□□□□ -0.64
SRSF4-204ENST00000489898 CCDC120Q96HB5 630 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 C5orf34Q96MH7 638 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 PTCHD1Q96NR3 888 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 SORBS1Q9BX66 1292 aaKnown RBP11.03□□□□□ -0.64
SRSF4-204ENST00000489898 CD244Q9BZW8 370 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 PITHD1Q9GZP4 211 aaPredicted RBP11.03□□□□□ -0.64
SRSF4-204ENST00000489898 ACSS3Q9H6R3 686 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 KCNK13Q9HB14 408 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 SNX15Q9NRS6 342 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 WWOXQ9NZC7 414 aa11.03□□□□□ -0.64
SRSF4-204ENST00000489898 ADAM10O14672 748 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 PRMT3O60678 531 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 STK16O75716 305 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 CLPSP04118 112 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 GCAP28676 217 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 CA7P43166 264 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 BTN3A2P78410 334 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 NAB1Q13506 487 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 SLMAPQ14BN4 828 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 SETDB1Q15047 1291 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 RBBP5Q15291 538 aaKnown RBP11.02□□□□□ -0.65
SRSF4-204ENST00000489898 MEP1AQ16819 746 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 GRTP1Q5TC63 336 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 DGAT2L6Q6ZPD8 337 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 TCAIMQ8N3R3 496 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 TMEM151AQ8N4L1 468 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 ACBD4Q8NC06 268 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 B3GNT7Q8NFL0 401 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 EXT2Q93063 718 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 TSPAN17Q96FV3 270 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 ZNF354BQ96LW1 612 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 GPR137Q96N19 417 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 F2RL3Q96RI0 385 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 MAPKAP1Q9BPZ7 522 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 EFCAB11Q9BUY7 163 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 NPLQ9BXD5 320 aaPredicted RBP11.02□□□□□ -0.65
SRSF4-204ENST00000489898 TSPAN10Q9H1Z9 355 aaPredicted RBP11.02□□□□□ -0.65
SRSF4-204ENST00000489898 CDC42EP4Q9H3Q1 356 aaKnown RBP11.02□□□□□ -0.65
SRSF4-204ENST00000489898 PLSCR2Q9NRY7 297 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 DEPPQ9NTK1 212 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 ZNF358Q9NW07 568 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 STMN3Q9NZ72 180 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms