RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 PIM1P11309 404 aaPredicted RBP9.51□□□□□ -0.89
USP11-211ENST00000489111 CKMT1AP12532 417 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 DRD2P14416 443 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 TRPC1P48995 793 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 SEPHS1P49903 392 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 ELF3P78545 371 aaPredicted RBP9.51□□□□□ -0.89
USP11-211ENST00000489111 MC1RQ01726 317 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 PROX2Q3B8N5 592 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 TCTE1Q5JU00 501 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 PLA2G2CQ5R387 149 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 WASHC2DQ5SRD0 308 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 PERM1Q5SV97 790 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 NDUFAF5Q5TEU4 345 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 TMEM214Q6NUQ4 689 aaKnown RBP9.51□□□□□ -0.89
USP11-211ENST00000489111 DGLUCYQ7Z3D6 616 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 NET1Q7Z628 596 aaPredicted RBP9.51□□□□□ -0.89
USP11-211ENST00000489111 KMT5CQ86Y97 462 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 HPS6Q86YV9 775 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 NATD1Q8N6N6 113 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 TTC29Q8NA56 475 aaPredicted RBP9.51□□□□□ -0.89
USP11-211ENST00000489111 OR4A15Q8NGL6 344 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 DNAJB14Q8TBM8 379 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 IFI44Q8TCB0 444 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 TM4SF18Q96CE8 201 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 COQ8BQ96D53 544 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 ZNF764Q96H86 408 aaPredicted RBP9.51□□□□□ -0.89
USP11-211ENST00000489111 CCDC115Q96NT0 180 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 GBP5Q96PP8 586 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 PANX1Q96RD7 426 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 SH3GL1Q99961 368 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 NUDT22Q9BRQ3 303 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 GPATCH1Q9BRR8 931 aaKnown RBP9.51□□□□□ -0.89
USP11-211ENST00000489111 FANCEQ9HB96 536 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 ANKHQ9HCJ1 492 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 PRDM7Q9NQW5 492 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 GIMAP4Q9NUV9 329 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 TEX10Q9NXF1 929 aaPredicted RBP9.51□□□□□ -0.89
USP11-211ENST00000489111 SLC7A8Q9UHI5 535 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 FBXW2Q9UKT8 454 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 PCDHGB4Q9UN71 923 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 SLC22A7Q9Y694 548 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 SPACA6W5XKT8 324 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 NCOR1O75376 2440 aa9.51□□□□□ -0.89
USP11-211ENST00000489111 THADAQ6YHU6 1953 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 ZNF860A6NHJ4 632 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 A8MU76 341 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 RNASET2O00584 256 aaKnown RBP9.5□□□□□ -0.89
USP11-211ENST00000489111 TOX3O15405 576 aaPredicted RBP9.5□□□□□ -0.89
USP11-211ENST00000489111 TBX19O60806 448 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 DNAJA2O60884 412 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 KLHL18O94889 574 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 CPSF4O95639 269 aaKnown RBP9.5□□□□□ -0.89
USP11-211ENST00000489111 AIFM1O95831 613 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 B3GALT4O96024 378 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 IL1RNP18510 177 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 EFNA1P20827 205 aaPredicted RBP9.5□□□□□ -0.89
USP11-211ENST00000489111 ME2P23368 584 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 SLC6A2P23975 617 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 NTSP30990 170 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 TLX1P31314 330 aaPredicted RBP9.5□□□□□ -0.89
USP11-211ENST00000489111 BUD31P41223 144 aaPredicted RBP9.5□□□□□ -0.89
USP11-211ENST00000489111 PHC1P78364 1004 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 CCL7P80098 99 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 SQSTM1Q13501 440 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 CEACAM7Q14002 265 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 SPATS1Q496A3 300 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 ZNF385BQ569K4 471 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 PIGGQ5H8A4 983 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 RABL3Q5HYI8 236 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 MRM1Q6IN84 353 aaKnown RBP9.5□□□□□ -0.89
USP11-211ENST00000489111 NIPAL1Q6NVV3 410 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 C8orf82Q6P1X6 216 aaPredicted RBP9.5□□□□□ -0.89
USP11-211ENST00000489111 TMEM71Q6P5X7 295 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 CYB5D1Q6P9G0 228 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 PGM2L1Q6PCE3 622 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 DLEU7Q6UYE1 221 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 KIAA2013Q8IYS2 634 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 MMP21Q8N119 569 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 RNF148Q8N7C7 305 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 AMER3Q8N944 861 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 FAM47BQ8NA70 645 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 OR8J3Q8NGG0 315 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 STMN2Q93045 179 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 EXOSC8Q96B26 276 aaKnown RBP9.5□□□□□ -0.89
USP11-211ENST00000489111 CNDP2Q96KP4 475 aaKnown RBP9.5□□□□□ -0.89
USP11-211ENST00000489111 PRRX2Q99811 253 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 INPP5KQ9BT40 448 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 PAIP1Q9H074 479 aaKnown RBP9.5□□□□□ -0.89
USP11-211ENST00000489111 LRRN3Q9H3W5 708 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 SERHLQ9NQF3 203 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 STARD5Q9NSY2 213 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 DNAAF2Q9NVR5 837 aaKnown RBP9.5□□□□□ -0.89
USP11-211ENST00000489111 MS4A12Q9NXJ0 267 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 EHD3Q9NZN3 535 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 TMEM9Q9P0T7 183 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 TMEM181Q9P2C4 612 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 ABCD2Q9UBJ2 740 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 SUCOQ9UBS9 1254 aaKnown RBP9.5□□□□□ -0.89
USP11-211ENST00000489111 FTSJ1Q9UET6 329 aa9.5□□□□□ -0.89
USP11-211ENST00000489111 BCAP29Q9UHQ4 241 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms