RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 ABHD17CQ6PCB6 329 aa18.06■□□□□ 0.48
CD55-209ENST00000488171 ZNF572Q7Z3I7 529 aaPredicted RBP18.06■□□□□ 0.48
CD55-209ENST00000488171 GALNTL5Q7Z4T8 443 aa18.06■□□□□ 0.48
CD55-209ENST00000488171 ISCA2Q86U28 154 aa18.06■□□□□ 0.48
CD55-209ENST00000488171 HORMAD2Q8N7B1 307 aa18.06■□□□□ 0.48
CD55-209ENST00000488171 FBF1Q8TES7 1133 aa18.06■□□□□ 0.48
CD55-209ENST00000488171 EXT2Q93063 718 aa18.06■□□□□ 0.48
CD55-209ENST00000488171 ALG9Q9H6U8 611 aa18.06■□□□□ 0.48
CD55-209ENST00000488171 TRIM45Q9H8W5 580 aaPredicted RBP18.06■□□□□ 0.48
CD55-209ENST00000488171 B3GALT2O43825 422 aa18.05■□□□□ 0.48
CD55-209ENST00000488171 CCNT2O60583 730 aaKnown RBP18.05■□□□□ 0.48
CD55-209ENST00000488171 MYO1DO94832 1006 aa18.05■□□□□ 0.48
CD55-209ENST00000488171 PPP2R1BP30154 601 aa18.05■□□□□ 0.48
CD55-209ENST00000488171 HSD17B7P56937 341 aa18.05■□□□□ 0.48
CD55-209ENST00000488171 E2F2Q14209 437 aa18.05■□□□□ 0.48
CD55-209ENST00000488171 EFTUD2Q15029 972 aaKnown RBP eCLIP18.05■□□□□ 0.482e-6■■■■■ 80.3
CD55-209ENST00000488171 TERF2Q15554 542 aa18.05■□□□□ 0.48
CD55-209ENST00000488171 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.05■□□□□ 0.48
CD55-209ENST00000488171 CRYBG3Q68DQ2 2970 aa18.05■□□□□ 0.48
CD55-209ENST00000488171 TRIM40Q6P9F5 258 aa18.05■□□□□ 0.48
CD55-209ENST00000488171 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.05■□□□□ 0.48
CD55-209ENST00000488171 FAM47BQ8NA70 645 aa18.05■□□□□ 0.48
CD55-209ENST00000488171 B3GNT7Q8NFL0 401 aa18.05■□□□□ 0.48
CD55-209ENST00000488171 GPR137Q96N19 417 aa18.05■□□□□ 0.48
CD55-209ENST00000488171 SERINC2Q96SA4 455 aa18.05■□□□□ 0.48
CD55-209ENST00000488171 EFCAB11Q9BUY7 163 aa18.05■□□□□ 0.48
CD55-209ENST00000488171 CD244Q9BZW8 370 aa18.05■□□□□ 0.48
CD55-209ENST00000488171 TSPAN10Q9H1Z9 355 aaPredicted RBP18.05■□□□□ 0.48
CD55-209ENST00000488171 PRTFDC1Q9NRG1 225 aa18.05■□□□□ 0.48
CD55-209ENST00000488171 ZNF223Q9UK11 482 aaPredicted RBP18.05■□□□□ 0.48
CD55-209ENST00000488171 PPIEQ9UNP9 301 aaKnown RBP18.05■□□□□ 0.48
CD55-209ENST00000488171 CELSR2Q9HCU4 2923 aa18.05■□□□□ 0.48
CD55-209ENST00000488171 A0A088AWK7 358 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 CCL21O00585 134 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 CYR61O00622 381 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 NME2P1O60361 137 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 SLC25A12O75746 678 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 TFEBP19484 476 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 ZNF10P21506 573 aaPredicted RBP18.04■□□□□ 0.48
CD55-209ENST00000488171 NME2P22392 152 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 CERS1P27544 350 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 STX2P32856 288 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 TRHRP34981 398 aaPredicted RBP18.04■□□□□ 0.48
CD55-209ENST00000488171 CYB561P49447 251 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 GPR143P51810 404 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 LIM2P55344 173 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 ALDH6A1Q02252 535 aaKnown RBP18.04■□□□□ 0.48
CD55-209ENST00000488171 GUCY2DQ02846 1103 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 RBPJQ06330 500 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 SLMAPQ14BN4 828 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 TBCCQ15814 346 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 RAPH1Q70E73 1250 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 LRRC70Q7Z2Q7 622 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 SIAH3Q8IW03 269 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 STAG3L4Q8TBR4 150 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 ADAMTS18Q8TE60 1221 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 THAP3Q8WTV1 239 aaPredicted RBP18.04■□□□□ 0.48
CD55-209ENST00000488171 ITLN2Q8WWU7 325 aaPredicted RBP18.04■□□□□ 0.48
CD55-209ENST00000488171 CCDC120Q96HB5 630 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 F2RL3Q96RI0 385 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 ATOH8Q96SQ7 321 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 CSF3RQ99062 836 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 DEFB126Q9BYW3 111 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 PRDM7Q9NQW5 492 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 PNO1Q9NRX1 252 aaKnown RBP18.04■□□□□ 0.48
CD55-209ENST00000488171 IGSF5Q9NSI5 407 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 NUDT4Q9NZJ9 180 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 DAPP1Q9UN19 280 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 TRBV11-1A0A0K0K1C0 115 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 CLDN4O14493 209 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 SLC19A2O60779 497 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 S100BP04271 92 aaPredicted RBP18.04■□□□□ 0.48
CD55-209ENST00000488171 HPDP32754 393 aaPredicted RBP18.04■□□□□ 0.48
CD55-209ENST00000488171 CASP2P42575 452 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 HLCSP50747 726 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 MTTPP55157 894 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 IRF8Q02556 426 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 SLC13A2Q13183 592 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 CHIT1Q13231 466 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 NAB1Q13506 487 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 LAPTM5Q13571 262 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 MAPKAPK3Q16644 382 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 UBE3DQ7Z6J8 389 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 ZNF595Q8IYB9 648 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 NMRAL1Q9HBL8 299 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 SH3BGRL2Q9UJC5 107 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 ZNF835Q9Y2P0 537 aa18.04■□□□□ 0.48
CD55-209ENST00000488171 ESYT3A0FGR9 886 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 NPIPA5E9PKD4 350 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 UBXN8O00124 270 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 FCHO1O14526 889 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 KERAO60938 352 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 LTA4HP09960 611 aaKnown RBP18.03■□□□□ 0.48
CD55-209ENST00000488171 CRABP2P29373 138 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 CLCN2P51788 898 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 SLC7A5Q01650 507 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 C3AR1Q16581 482 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 KRTCAP3Q53RY4 240 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 PAGE2BQ5JRK9 111 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 RNFT1Q5M7Z0 435 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms