RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 INTS10Q9NVR2 710 aaKnown RBP5.11□□□□□ -1.59
VPS50-212ENST00000476413 NINJ2Q9NZG7 142 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 DBF4Q9UBU7 674 aaPredicted RBP5.11□□□□□ -1.59
VPS50-212ENST00000476413 GAB2Q9UQC2 676 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 PPP1R3CQ9UQK1 317 aa5.11□□□□□ -1.59
VPS50-212ENST00000476413 STRAPQ9Y3F4 350 aaKnown RBP5.11□□□□□ -1.59
VPS50-212ENST00000476413 PRR23AA6NEV1 266 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 NPIPB9F8W1W9 429 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 PRDM1O75626 825 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 CEACAM4O75871 244 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 GAS8O95995 478 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 EPOP01588 193 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 SLC4A1P02730 911 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 ANPEPP15144 967 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 SELEP16581 610 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 GAP43P17677 238 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 C4BPBP20851 252 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 FEN1P39748 380 aaKnown RBP5.1□□□□□ -1.59
VPS50-212ENST00000476413 BACE1P56817 501 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 TSTA3Q13630 321 aaPredicted RBP5.1□□□□□ -1.59
VPS50-212ENST00000476413 ARHGAP11AQ6P4F7 1023 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 DLEU7Q6UYE1 221 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 TMEM64Q6YI46 380 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 ADAMTSL2Q86TH1 951 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 OR5T2Q8NGG2 359 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 MRGPRDQ8TDS7 321 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 UBTD2Q8WUN7 234 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 UBAC1Q9BSL1 405 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 TEX13AQ9BXU3 409 aaPredicted RBP5.1□□□□□ -1.59
VPS50-212ENST00000476413 HOXD1Q9GZZ0 328 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 ABCG8Q9H221 673 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 WWOXQ9NZC7 414 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 ERVK-19Q9WJR5 959 aa5.1□□□□□ -1.59
VPS50-212ENST00000476413 UMODL1Q5DID0 1318 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 hCG_38984A0A1B0GV85 526 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 C19orf81C9J6K1 198 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 SURF4O15260 269 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 SIGLEC5O15389 551 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 MAGEC1O60732 1142 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 PCP11498 1178 aaKnown RBP5.09□□□□□ -1.59
VPS50-212ENST00000476413 AREGP15514 252 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 HLA-FP30511 346 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 CCR4P51679 360 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 EVCP57679 992 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 SRP54P61011 504 aaKnown RBP5.09□□□□□ -1.59
VPS50-212ENST00000476413 SNRPD1P62314 119 aaKnown RBP5.09□□□□□ -1.59
VPS50-212ENST00000476413 GALK2Q01415 458 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 GABPAQ06546 454 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 PDK1Q15118 436 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 TMEM30BQ3MIR4 351 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 LYPLAL1Q5VWZ2 237 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 Q6ZVQ6 151 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 NLRP14Q86W24 1093 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 MRPL43Q8N983 215 aaKnown RBP5.09□□□□□ -1.59
VPS50-212ENST00000476413 TMEM185AQ8NFB2 350 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 OR4D10Q8NGI6 311 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 GPR148Q8TDV2 347 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 DNASE2BQ8WZ79 361 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 MAGED4Q96JG8 741 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 ERGIC2Q96RQ1 377 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 PKP2Q99959 881 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 OVOL2Q9BRP0 275 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 PAPOLGQ9BWT3 736 aaKnown RBP5.09□□□□□ -1.59
VPS50-212ENST00000476413 CLEC7AQ9BXN2 247 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 VIPAS39Q9H9C1 493 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 CACNG5Q9UF02 275 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 TSPAN16Q9UKR8 245 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 ODF2LQ9ULJ1 636 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 PLCL2Q9UPR0 1127 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 EXOC7Q9UPT5 735 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 OR1A2Q9Y585 309 aa5.09□□□□□ -1.59
VPS50-212ENST00000476413 MACROD2A1Z1Q3 448 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 G3V2L1 256 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 RNF103O00237 685 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 NR5A2O00482 541 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 RABIFP47224 123 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 PITPNBP48739 271 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 WASHC5Q12768 1159 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 C3AR1Q16581 482 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 KLHL22Q53GT1 634 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 SNRNP48Q6IEG0 339 aaKnown RBP5.08□□□□□ -1.6
VPS50-212ENST00000476413 CACUL1Q86Y37 369 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 PRCCQ92733 491 aaPredicted RBP5.08□□□□□ -1.6
VPS50-212ENST00000476413 GLYATL1Q969I3 302 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 TMEM186Q96B77 213 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 FBXO17Q96EF6 278 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 MRPL53Q96EL3 112 aaKnown RBP5.08□□□□□ -1.6
VPS50-212ENST00000476413 S1PR3Q99500 378 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 XPO4Q9C0E2 1151 aaKnown RBP5.08□□□□□ -1.6
VPS50-212ENST00000476413 HSD3B7Q9H2F3 369 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 DCLRE1BQ9H816 532 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 FGF22Q9HCT0 170 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 FAM212BQ9NTI7 297 aaPredicted RBP5.08□□□□□ -1.6
VPS50-212ENST00000476413 ZNF319Q9P2F9 582 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 DNPEPQ9ULA0 475 aa5.08□□□□□ -1.6
VPS50-212ENST00000476413 MRPS28Q9Y2Q9 187 aaKnown RBP5.08□□□□□ -1.6
VPS50-212ENST00000476413 CCDC69A6NI79 296 aa5.07□□□□□ -1.6
VPS50-212ENST00000476413 FGF19O95750 216 aa5.07□□□□□ -1.6
VPS50-212ENST00000476413 ANGPTL1O95841 491 aa5.07□□□□□ -1.6
VPS50-212ENST00000476413 IGHEP01854 428 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms