RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 CREB3L4Q8TEY5 395 aa16.07■□□□□ 0.16
HMGN1-210ENST00000464078 NCLNQ969V3 563 aa16.07■□□□□ 0.16
HMGN1-210ENST00000464078 GAL3ST3Q96A11 431 aa16.07■□□□□ 0.16
HMGN1-210ENST00000464078 CCDC77Q9BR77 488 aa16.07■□□□□ 0.16
HMGN1-210ENST00000464078 NPLQ9BXD5 320 aaPredicted RBP16.07■□□□□ 0.16
HMGN1-210ENST00000464078 RHBGQ9H310 441 aa16.07■□□□□ 0.16
HMGN1-210ENST00000464078 KLHL31Q9H511 634 aa16.07■□□□□ 0.16
HMGN1-210ENST00000464078 ADAP2Q9NPF8 381 aa16.07■□□□□ 0.16
HMGN1-210ENST00000464078 ERVK-11Q9UQG0 969 aa16.07■□□□□ 0.16
HMGN1-210ENST00000464078 PINLYPA6NC86 204 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 A8MVJ9 347 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 TGFBR3LH3BV60 316 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 OR2J2O76002 312 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 ZFAND5O76080 213 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 PDE9AO76083 593 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 GLSO94925 669 aaPredicted RBP16.06■□□□□ 0.16
HMGN1-210ENST00000464078 ZWINTO95229 277 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 TTC4O95801 387 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 AHSGP02765 367 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 HNF4AP41235 474 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 IST1P53990 364 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 PPIAP62937 165 aaKnown RBP16.06■□□□□ 0.16
HMGN1-210ENST00000464078 CYP1B1Q16678 543 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 PPP1R3AQ16821 1122 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 GXYLT1Q4G148 440 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 NDUFAF5Q5TEU4 345 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 NXPE4Q6UWF7 544 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 TMPRSS11BQ86T26 416 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 SLC22A16Q86VW1 577 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 TGIF2LYQ8IUE0 185 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 CHDHQ8NE62 594 aaPredicted RBP16.06■□□□□ 0.16
HMGN1-210ENST00000464078 PDLIM5Q96HC4 596 aaKnown RBP16.06■□□□□ 0.16
HMGN1-210ENST00000464078 TTTY12Q9BZ98 90 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 DEFB127Q9H1M4 99 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 PNPLA3Q9NST1 481 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 HPF1Q9NWY4 346 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 CORO1CQ9ULV4 474 aaPredicted RBP16.06■□□□□ 0.16
HMGN1-210ENST00000464078 DYRK1BQ9Y463 629 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 L3MBTL1Q9Y468 752 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 FAM215AQ9Y5M1 114 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 KCNE2Q9Y6J6 123 aa16.06■□□□□ 0.16
HMGN1-210ENST00000464078 A0A1B0GVC2 190 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 NPIPA2E9PIF3 369 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 NPIPA3F8WFD2 350 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 PRKNO60260 465 aaPredicted RBP16.05■□□□□ 0.16
HMGN1-210ENST00000464078 GUCA1CO95843 209 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 GSTM2P28161 218 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 STXBP1P61764 594 aaKnown RBP16.05■□□□□ 0.16
HMGN1-210ENST00000464078 PDAP1Q13442 181 aaKnown RBP16.05■□□□□ 0.16
HMGN1-210ENST00000464078 ELAVL1Q15717 326 aaKnown RBP16.05■□□□□ 0.16
HMGN1-210ENST00000464078 TOR1AIP1Q5JTV8 583 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 HECTD2Q5U5R9 776 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 B3GNT6Q6ZMB0 384 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 GK5Q6ZS86 529 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 THOC6Q86W42 341 aaKnown RBP16.05■□□□□ 0.16
HMGN1-210ENST00000464078 PPIL6Q8IXY8 311 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 SPC24Q8NBT2 197 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 ASB15Q8WXK1 588 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 NRGNQ92686 78 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 MAGOHBQ96A72 148 aaKnown RBP16.05■□□□□ 0.16
HMGN1-210ENST00000464078 SMC6Q96SB8 1091 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 TTYH2Q9BSA4 534 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 NAT9Q9BTE0 207 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 LZTFL1Q9NQ48 299 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 PRTFDC1Q9NRG1 225 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 PNO1Q9NRX1 252 aaKnown RBP16.05■□□□□ 0.16
HMGN1-210ENST00000464078 MYOTQ9UBF9 498 aa16.05■□□□□ 0.16
HMGN1-210ENST00000464078 A0A0G2JMM0 328 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 A0A1W2PPB8 328 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 A0A1W2PRS3 328 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 FAM166BA8MTA8 275 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 KIR3DP1A8MWS1 328 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 CLDN4O14493 209 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 OR6B1O95007 311 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 NADKO95544 446 aaPredicted RBP16.04■□□□□ 0.16
HMGN1-210ENST00000464078 GLI4P10075 376 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 HOXB4P17483 251 aaPredicted RBP16.04■□□□□ 0.16
HMGN1-210ENST00000464078 PPP2R1BP30154 601 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 ZFP36L2P47974 494 aaKnown RBP16.04■□□□□ 0.16
HMGN1-210ENST00000464078 RAB38P57729 211 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 PLGLB1Q02325 96 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 HYAL4Q2M3T9 481 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 XKR6Q5GH73 641 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 SPANXN3Q5MJ09 141 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 CCDC137Q6PK04 289 aaKnown RBP16.04■□□□□ 0.16
HMGN1-210ENST00000464078 ZNF595Q8IYB9 648 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 RASGEF1CQ8N431 466 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 FAM109AQ8N4B1 249 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 TTLQ8NG68 377 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 RASL10BQ96S79 203 aa16.04■□□□□ 0.16
HMGN1-210ENST00000464078 MRPS33Q9Y291 106 aaKnown RBP16.04■□□□□ 0.16
HMGN1-210ENST00000464078 AQP7O14520 342 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 CTAG2O75638 210 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 HNRNPH1P31943 449 aaKnown RBP16.03■□□□□ 0.16
HMGN1-210ENST00000464078 SOX3P41225 446 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 HNRNPFP52597 415 aaKnown RBP16.03■□□□□ 0.16
HMGN1-210ENST00000464078 DLX5P56178 289 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 BTN3A2P78410 334 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 CDKL1Q00532 357 aa16.03■□□□□ 0.16
HMGN1-210ENST00000464078 SLC13A2Q13183 592 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms