RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 MAP3K3Q99759 626 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 KCTD14Q9BQ13 255 aaPredicted RBP23.21■■□□□ 1.31
U2AF1-204ENST00000459639 CPPED1Q9BRF8 314 aaPredicted RBP23.21■■□□□ 1.31
U2AF1-204ENST00000459639 COPS7BQ9H9Q2 264 aaPredicted RBP23.21■■□□□ 1.31
U2AF1-204ENST00000459639 TLCD2A6NGC4 264 aa23.2■■□□□ 1.3
U2AF1-204ENST00000459639 ZSCAN9O15535 394 aaPredicted RBP23.2■■□□□ 1.3
U2AF1-204ENST00000459639 ZNF888P0CJ79 500 aaPredicted RBP23.2■■□□□ 1.3
U2AF1-204ENST00000459639 SMIM10L1P0DMW3 83 aa23.2■■□□□ 1.3
U2AF1-204ENST00000459639 DRD2P14416 443 aa23.2■■□□□ 1.3
U2AF1-204ENST00000459639 MUM1Q2TAK8 710 aa23.2■■□□□ 1.3
U2AF1-204ENST00000459639 ZC3H12BQ5HYM0 836 aaKnown RBP23.2■■□□□ 1.3
U2AF1-204ENST00000459639 BHLHE22Q8NFJ8 381 aaPredicted RBP23.2■■□□□ 1.3
U2AF1-204ENST00000459639 TCTN2Q96GX1 697 aa23.2■■□□□ 1.3
U2AF1-204ENST00000459639 SMIM10Q96HG1 83 aa23.2■■□□□ 1.3
U2AF1-204ENST00000459639 FAIM2Q9BWQ8 316 aa23.2■■□□□ 1.3
U2AF1-204ENST00000459639 PCDHAC1Q9H158 963 aa23.2■■□□□ 1.3
U2AF1-204ENST00000459639 LYARQ9NX58 379 aaKnown RBP23.2■■□□□ 1.3
U2AF1-204ENST00000459639 TEX10Q9NXF1 929 aaPredicted RBP23.2■■□□□ 1.3
U2AF1-204ENST00000459639 IGHV1OR21-1A0A087WYE8 117 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 SLC9B1P1A6NJY1 282 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 STAMBPO95630 424 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 ZCCHC18P0CG32 403 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 CERS1P27544 350 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 ALDH4A1P30038 563 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 PPM1FP49593 454 aaPredicted RBP23.19■■□□□ 1.3
U2AF1-204ENST00000459639 SLAMF1Q13291 335 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 SUZ12Q15022 739 aaKnown RBP23.19■■□□□ 1.3
U2AF1-204ENST00000459639 ABHD13Q7L211 337 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 PTRH1Q86Y79 214 aaKnown RBP23.19■■□□□ 1.3
U2AF1-204ENST00000459639 MMP21Q8N119 569 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 FAM47BQ8NA70 645 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 OR4C6Q8NH72 309 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 ZDHHC12Q96GR4 267 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 PHF12Q96QT6 1004 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 FAM60AQ9NP50 221 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 FSCN3Q9NQT6 498 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 EHD3Q9NZN3 535 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 GMPR2Q9P2T1 348 aaKnown RBP23.19■■□□□ 1.3
U2AF1-204ENST00000459639 ARID1BQ8NFD5 2236 aaPredicted RBP23.19■■□□□ 1.3
U2AF1-204ENST00000459639 CABIN1Q9Y6J0 2220 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 SH3BP5O60239 455 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 CPSF4O95639 269 aaKnown RBP23.19■■□□□ 1.3
U2AF1-204ENST00000459639 GSNP06396 782 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 CCT8P50990 548 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 GPLD1P80108 840 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 RCN1Q15293 331 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 MPEG1Q2M385 716 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 SLC23A3Q6PIS1 610 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 FAM92BQ6ZTR7 304 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 GATAD2AQ86YP4 633 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 HIPK4Q8NE63 616 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 GOT1L1Q8NHS2 421 aaPredicted RBP23.19■■□□□ 1.3
U2AF1-204ENST00000459639 SLC26A7Q8TE54 656 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 AHCYL2Q96HN2 611 aaKnown RBP23.19■■□□□ 1.3
U2AF1-204ENST00000459639 ECSITQ9BQ95 431 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 CCDC3Q9BQI4 270 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 THUMPD3Q9BV44 507 aaKnown RBP23.19■■□□□ 1.3
U2AF1-204ENST00000459639 NLNQ9BYT8 704 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 GAREM1Q9H706 876 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 PADI4Q9UM07 663 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 SLC6A14Q9UN76 642 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 ASB4Q9Y574 426 aa23.19■■□□□ 1.3
U2AF1-204ENST00000459639 H0Y3Z8 333 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 NVLO15381 856 aaKnown RBP23.18■■□□□ 1.3
U2AF1-204ENST00000459639 DUX1O43812 170 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 ZNF10P21506 573 aaPredicted RBP23.18■■□□□ 1.3
U2AF1-204ENST00000459639 HTR1EP28566 365 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 ALDH9A1P49189 494 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 ERFP50548 548 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 GFERP55789 205 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 OR1D5P58170 312 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 BTN3A2P78410 334 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 FXNQ16595 210 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 NDUFAF5Q5TEU4 345 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 DHFR2Q86XF0 187 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 CARFQ8N187 725 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 CSNK1A1LQ8N752 337 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 OR6C4Q8NGE1 309 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 TGM7Q96PF1 710 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 CHRNA10Q9GZZ6 450 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 IKZF5Q9H5V7 419 aa23.18■■□□□ 1.3
U2AF1-204ENST00000459639 EPN2O95208 641 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 CER1O95813 267 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 EFNA1P20827 205 aaPredicted RBP23.17■■□□□ 1.3
U2AF1-204ENST00000459639 PRSS53Q2L4Q9 553 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 TRIM61Q5EBN2 209 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 TMEM214Q6NUQ4 689 aaKnown RBP23.17■■□□□ 1.3
U2AF1-204ENST00000459639 ZNF621Q6ZSS3 439 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 IFNEQ86WN2 208 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 DNAJC22Q8N4W6 341 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 OR4A15Q8NGL6 344 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 ZCCHC10Q8TBK6 192 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 NCSTNQ92542 709 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 CIDECQ96AQ7 238 aaPredicted RBP23.17■■□□□ 1.3
U2AF1-204ENST00000459639 SERINC2Q96SA4 455 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 TRIM15Q9C019 465 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 S100A14Q9HCY8 104 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 TAS2R7Q9NYW3 318 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 ACTR3BQ9P1U1 418 aa23.17■■□□□ 1.3
U2AF1-204ENST00000459639 ZNF282Q9UDV7 671 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms