RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 OR52N2Q8NGI0 321 aa10.88□□□□□ -0.67
GARNL3-210ENST00000453030 CREB3L4Q8TEY5 395 aa10.88□□□□□ -0.67
GARNL3-210ENST00000453030 GAL3ST3Q96A11 431 aa10.88□□□□□ -0.67
GARNL3-210ENST00000453030 VMP1Q96GC9 406 aa10.88□□□□□ -0.67
GARNL3-210ENST00000453030 SMIM10Q96HG1 83 aa10.88□□□□□ -0.67
GARNL3-210ENST00000453030 FAR2Q96K12 515 aa10.88□□□□□ -0.67
GARNL3-210ENST00000453030 PWWP2AQ96N64 755 aa10.88□□□□□ -0.67
GARNL3-210ENST00000453030 OSBPL9Q96SU4 736 aa10.88□□□□□ -0.67
GARNL3-210ENST00000453030 CCDC77Q9BR77 488 aa10.88□□□□□ -0.67
GARNL3-210ENST00000453030 WDR83Q9BRX9 315 aaKnown RBP10.88□□□□□ -0.67
GARNL3-210ENST00000453030 NAT9Q9BTE0 207 aa10.88□□□□□ -0.67
GARNL3-210ENST00000453030 LIN28AQ9H9Z2 209 aaKnown RBP10.88□□□□□ -0.67
GARNL3-210ENST00000453030 NPDC1Q9NQX5 325 aaPredicted RBP10.88□□□□□ -0.67
GARNL3-210ENST00000453030 PRTFDC1Q9NRG1 225 aa10.88□□□□□ -0.67
GARNL3-210ENST00000453030 KCMF1Q9P0J7 381 aa10.88□□□□□ -0.67
GARNL3-210ENST00000453030 ERVK-11Q9UQG0 969 aa10.88□□□□□ -0.67
GARNL3-210ENST00000453030 HRH3Q9Y5N1 445 aa10.88□□□□□ -0.67
GARNL3-210ENST00000453030 KCNE2Q9Y6J6 123 aa10.88□□□□□ -0.67
GARNL3-210ENST00000453030 NINQ8N4C6 2090 aa10.88□□□□□ -0.67
GARNL3-210ENST00000453030 ANKHD1Q8IWZ3 2542 aaKnown RBP10.87□□□□□ -0.67
GARNL3-210ENST00000453030 A0A0G2JMM0 328 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 A0A1W2PPB8 328 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 A0A1W2PRS3 328 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 PINLYPA6NC86 204 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 A8MVJ9 347 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 KIR3DP1A8MWS1 328 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 G3V3Y1 287 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 TUBB4AP04350 444 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 CAPN3P20807 821 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 CHRNB4P30926 498 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 ELK3P41970 407 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 SSR4P51571 173 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 PLGLB1Q02325 96 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 RUNX2Q13950 521 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 SLBPQ14493 270 aaKnown RBP eCLIP10.87□□□□□ -0.67
GARNL3-210ENST00000453030 TERF2Q15554 542 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 TESK1Q15569 626 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 C18orf21Q32NC0 220 aaPredicted RBP10.87□□□□□ -0.67
GARNL3-210ENST00000453030 ARHGAP11AQ6P4F7 1023 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 CCDC71Q8IV32 467 aaPredicted RBP10.87□□□□□ -0.67
GARNL3-210ENST00000453030 SLC35F6Q8N357 371 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 PSD4Q8NDX1 1056 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 C16orf52Q8NHV5 167 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 CSF3RQ99062 836 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 UCK2Q9BZX2 261 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 DEFB127Q9H1M4 99 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 TP63Q9H3D4 680 aaPredicted RBP10.87□□□□□ -0.67
GARNL3-210ENST00000453030 CLK4Q9HAZ1 481 aaKnown RBP10.87□□□□□ -0.67
GARNL3-210ENST00000453030 TIMMDC1Q9NPL8 285 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 DEPPQ9NTK1 212 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 HPF1Q9NWY4 346 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 RNF6Q9Y252 685 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 PSAT1Q9Y617 370 aa10.87□□□□□ -0.67
GARNL3-210ENST00000453030 HRNRQ86YZ3 2850 aaPredicted RBP10.87□□□□□ -0.67
GARNL3-210ENST00000453030 MYOCOSA0A1B0GUC4 107 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 FAM95CA0A1B0GW59 222 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 NCF1BA6NI72 391 aaPredicted RBP10.86□□□□□ -0.67
GARNL3-210ENST00000453030 USP27XA6NNY8 438 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 NCF1CA8MVU1 366 aaPredicted RBP10.86□□□□□ -0.67
GARNL3-210ENST00000453030 B3GALT2O43825 422 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 OR2J2O76002 312 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 ZFAND5O76080 213 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 OR6B1O95007 311 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 NCF1P14598 390 aaPredicted RBP10.86□□□□□ -0.67
GARNL3-210ENST00000453030 CERS1P27544 350 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 GDF5P43026 501 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 PLA2G16P53816 162 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 RAB38P57729 211 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 TSNQ15631 228 aaKnown RBP10.86□□□□□ -0.67
GARNL3-210ENST00000453030 TMEM211Q6ICI0 200 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 ADNP2Q6IQ32 1131 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 IL20RBQ6UXL0 311 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 TMIGD1Q6UXZ0 262 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 TMEM200AQ86VY9 491 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 ANKMY2Q8IV38 441 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 KLHDC8AQ8IYD2 350 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 PDIK1LQ8N165 341 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 OR5M3Q8NGP4 307 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 ACTRT1Q8TDG2 376 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 ASB5Q8WWX0 329 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 ASB15Q8WXK1 588 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 RND1Q92730 232 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 MS4A6EQ96DS6 147 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 PDLIM5Q96HC4 596 aaKnown RBP10.86□□□□□ -0.67
GARNL3-210ENST00000453030 SEC16BQ96JE7 1060 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 TREX2Q9BQ50 279 aaPredicted RBP10.86□□□□□ -0.67
GARNL3-210ENST00000453030 ADAP2Q9NPF8 381 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 PLSCR2Q9NRY7 297 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 MRPS33Q9Y291 106 aaKnown RBP10.86□□□□□ -0.67
GARNL3-210ENST00000453030 OARD1Q9Y530 152 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 CLDN16Q9Y5I7 305 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 LIPGQ9Y5X9 500 aa10.86□□□□□ -0.67
GARNL3-210ENST00000453030 NAV3Q8IVL0 2385 aa10.85□□□□□ -0.67
GARNL3-210ENST00000453030 VPS13CQ709C8 3753 aa10.85□□□□□ -0.67
GARNL3-210ENST00000453030 ABCA4P78363 2273 aa10.85□□□□□ -0.67
GARNL3-210ENST00000453030 A0A088AWK7 358 aa10.85□□□□□ -0.67
GARNL3-210ENST00000453030 LRIT2A6NDA9 550 aa10.85□□□□□ -0.67
GARNL3-210ENST00000453030 NPIPA2E9PIF3 369 aa10.85□□□□□ -0.67
GARNL3-210ENST00000453030 NPIPA3F8WFD2 350 aa10.85□□□□□ -0.67
GARNL3-210ENST00000453030 ACOT7O00154 380 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms