RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 NCLNQ969V3 563 aa8.22□□□□□ -1.09
DEPDC1B-202ENST00000453022 VMP1Q96GC9 406 aa8.22□□□□□ -1.09
DEPDC1B-202ENST00000453022 SEC16BQ96JE7 1060 aa8.22□□□□□ -1.09
DEPDC1B-202ENST00000453022 AIF1LQ9BQI0 150 aa8.22□□□□□ -1.09
DEPDC1B-202ENST00000453022 WDR83Q9BRX9 315 aaKnown RBP8.22□□□□□ -1.09
DEPDC1B-202ENST00000453022 LIN28AQ9H9Z2 209 aaKnown RBP8.22□□□□□ -1.09
DEPDC1B-202ENST00000453022 KCMF1Q9P0J7 381 aa8.22□□□□□ -1.09
DEPDC1B-202ENST00000453022 FBXW2Q9UKT8 454 aa8.22□□□□□ -1.09
DEPDC1B-202ENST00000453022 SLC22A14Q9Y267 594 aa8.22□□□□□ -1.09
DEPDC1B-202ENST00000453022 DYRK1BQ9Y463 629 aa8.22□□□□□ -1.09
DEPDC1B-202ENST00000453022 MMACHCQ9Y4U1 282 aa8.22□□□□□ -1.09
DEPDC1B-202ENST00000453022 EXPH5Q8NEV8 1989 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 DNHD1Q96M86 4753 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 PABPN1LA6NDY0 278 aaKnown RBP8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 NPEPPSL1A6NEC2 478 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 URADA6NGE7 173 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 GOLGA6L6A8MZA4 724 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 PGRMC1O00264 195 aaKnown RBP8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 CDC7O00311 574 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 DNALI1O14645 258 aaPredicted RBP8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 OR2J2O76002 312 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 TBX6O95947 436 aaPredicted RBP8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 TUBB4AP04350 444 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 FREM3P0C091 2139 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 ZNF37AP17032 561 aaPredicted RBP8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 FNTAP49354 379 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 SSR4P51571 173 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 NUP107P57740 925 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 BTN3A2P78410 334 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 ZNF460Q14592 562 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 XKR6Q5GH73 641 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 TMEM211Q6ICI0 200 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 FAM45BPQ6NSW5 357 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 TRMT10BQ6PF06 316 aaKnown RBP8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 FAM47BQ8NA70 645 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 ARMC2Q8NEN0 867 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 OR2M7Q8NG81 312 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 FAM45AQ8TCE6 357 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 NRGNQ92686 78 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 RND1Q92730 232 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 GAL3ST3Q96A11 431 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 PDLIM5Q96HC4 596 aaKnown RBP8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 PBKQ96KB5 322 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 CSF3RQ99062 836 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 TRIM54Q9BYV2 358 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 DEFB127Q9H1M4 99 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 ZDHHC11Q9H8X9 412 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 TIMMDC1Q9NPL8 285 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 PNO1Q9NRX1 252 aaKnown RBP8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 PNPLA3Q9NST1 481 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 CORO1CQ9ULV4 474 aaPredicted RBP8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 PPP2R2CQ9Y2T4 447 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 VWA7Q9Y334 891 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 LIPGQ9Y5X9 500 aa8.21□□□□□ -1.1
DEPDC1B-202ENST00000453022 PRRC2AP48634 2157 aaKnown RBP8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 LRIT2A6NDA9 550 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 FAM166BA8MTA8 275 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 G3V3Y1 287 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 ERI3O43414 337 aaKnown RBP8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 GLSO94925 669 aaPredicted RBP8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 OR6B1O95007 311 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 HOXD4P09016 255 aaPredicted RBP8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 SOX3P41225 446 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 HSD17B7P56937 341 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 RAB38P57729 211 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 PMPCAQ10713 525 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 C18orf21Q32NC0 220 aaPredicted RBP8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 BBS9Q3SYG4 887 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 HP1BP3Q5SSJ5 553 aaPredicted RBP8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 ADNP2Q6IQ32 1131 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 SLCO4C1Q6ZQN7 724 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 VN1R5Q7Z5H4 357 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 CLNKQ7Z7G1 428 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 GABPB2Q8TAK5 448 aaPredicted RBP8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 GRK7Q8WTQ7 553 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 SREK1Q8WXA9 508 aaKnown RBP8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 MS4A6EQ96DS6 147 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 PWWP2AQ96N64 755 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 QRFPRQ96P65 431 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 RASL10BQ96S79 203 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 NAT9Q9BTE0 207 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 TTTY12Q9BZ98 90 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 ADAP2Q9NPF8 381 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 KCNJ16Q9NPI9 418 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 PPANQ9NQ55 473 aaKnown RBP8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 PRTFDC1Q9NRG1 225 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 CHMP2BQ9UQN3 213 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 YARS2Q9Y2Z4 477 aaKnown RBP8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 JRKLQ9Y4A0 524 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 FAM215AQ9Y5M1 114 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 PSAT1Q9Y617 370 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 KCNE2Q9Y6J6 123 aa8.2□□□□□ -1.1
DEPDC1B-202ENST00000453022 MYOCOSA0A1B0GUC4 107 aa8.19□□□□□ -1.1
DEPDC1B-202ENST00000453022 USP27XA6NNY8 438 aa8.19□□□□□ -1.1
DEPDC1B-202ENST00000453022 A8MVJ9 347 aa8.19□□□□□ -1.1
DEPDC1B-202ENST00000453022 FOXO6A8MYZ6 492 aa8.19□□□□□ -1.1
DEPDC1B-202ENST00000453022 NPIPA2E9PIF3 369 aa8.19□□□□□ -1.1
DEPDC1B-202ENST00000453022 NPIPA3F8WFD2 350 aa8.19□□□□□ -1.1
DEPDC1B-202ENST00000453022 WWP2O00308 870 aa8.19□□□□□ -1.1
DEPDC1B-202ENST00000453022 CYR61O00622 381 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms