RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 ALAS2P22557 587 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 ASMTP46597 345 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 SLC9A5Q14940 896 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 GARNL3Q5VVW2 1013 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 PPP1R3BQ86XI6 285 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 TMEM126BQ8IUX1 230 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 TMEM132CQ8N3T6 1108 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 ZCCHC7Q8N3Z6 543 aaKnown RBP13.87□□□□□ -0.19
TNF-208ENST00000449264 NUDT8Q8WV74 236 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 SERINC2Q96SA4 455 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 MRGBPQ9NV56 204 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 TEX10Q9NXF1 929 aaPredicted RBP13.87□□□□□ -0.19
TNF-208ENST00000449264 ZIM2Q9NZV7 527 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 CCT8L1PA6NM43 557 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 TMX2-CTNND1H3BSU7 103 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 EBAG9O00559 213 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 TM4SF5O14894 197 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 ANKRD28O15084 1053 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 POLR1CO15160 346 aaPredicted RBP13.86□□□□□ -0.19
TNF-208ENST00000449264 SCRG1O75711 98 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 SCELO95171 688 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 TIAF1O95411 115 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 FAM58BPP0C7Q3 252 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 CDK4P11802 303 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 CEACAM1P13688 526 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 ITIH1P19827 911 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 JAK1P23458 1154 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 ALDH9A1P49189 494 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 HNRNPH2P55795 449 aaKnown RBP13.86□□□□□ -0.19
TNF-208ENST00000449264 SKP1P63208 163 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 FAM214AQ32MH5 1076 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 CYB5D1Q6P9G0 228 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 FAM9CQ8IZT9 166 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 MMP21Q8N119 569 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 POU5F2Q8N7G0 328 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 BMPERQ8N8U9 685 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 OR5T3Q8NGG3 340 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 PROKR1Q8TCW9 393 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 MMABQ96EY8 250 aaPredicted RBP13.86□□□□□ -0.19
TNF-208ENST00000449264 ZBTB18Q99592 522 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 MYNNQ9NPC7 610 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 TXLNGQ9NUQ3 528 aa13.86□□□□□ -0.19
TNF-208ENST00000449264 WDFY3Q8IZQ1 3526 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 FOXS1O43638 330 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 UBOX5O94941 541 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 IL12AP29459 219 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 HPCAL1P37235 193 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 AVPR1BP47901 424 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 MAPK10P53779 464 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 CLDN8P56748 225 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 IRX1P78414 480 aaPredicted RBP13.85□□□□□ -0.19
TNF-208ENST00000449264 MC1RQ01726 317 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 C2orf80Q0P641 193 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 FAM53BQ14153 422 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 C1orf189Q5VU69 101 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 ANKRD26P1Q6NSI1 321 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 PWWP2BQ6NUJ5 590 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 RAB11FIP2Q7L804 512 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 PMEPA1Q969W9 287 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 TM4SF18Q96CE8 201 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 MAPKAP1Q9BPZ7 522 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 ACTR5Q9H9F9 607 aaPredicted RBP13.85□□□□□ -0.19
TNF-208ENST00000449264 LYARQ9NX58 379 aaKnown RBP13.85□□□□□ -0.19
TNF-208ENST00000449264 HCN3Q9P1Z3 774 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 MAU2Q9Y6X3 613 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 LOC100653049A0A140TA62 436 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 PMS2P1A4D2B8 440 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 CAPN14A8MX76 684 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 SCAMP2O15127 329 aaKnown RBP13.85□□□□□ -0.19
TNF-208ENST00000449264 SLC22A2O15244 555 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 DNAJB6O75190 326 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 PRKRAO75569 313 aaKnown RBP13.85□□□□□ -0.19
TNF-208ENST00000449264 KRT34O76011 436 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 DKK1O94907 266 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 NSA2O95478 260 aaKnown RBP13.85□□□□□ -0.19
TNF-208ENST00000449264 CBX6O95503 412 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 JMJD7P0C870 316 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 COX7A2P14406 83 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 PRPS1L1P21108 318 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 MRPL19P49406 292 aaKnown RBP13.85□□□□□ -0.19
TNF-208ENST00000449264 POLR2JP52435 117 aaKnown RBP13.85□□□□□ -0.19
TNF-208ENST00000449264 CLNS1AP54105 237 aaKnown RBP13.85□□□□□ -0.19
TNF-208ENST00000449264 ARSFP54793 590 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 EMP3P54852 163 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 LIM2P55344 173 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 KCNK10P57789 538 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 MC2RQ01718 297 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 KLC1Q07866 573 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 RUNX2Q13950 521 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 TIGD2Q4W5G0 525 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 FAM71E1Q6IPT2 247 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 C6orf89Q6UWU4 347 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 IKBIPQ70UQ0 350 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 SNX32Q86XE0 403 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 FUNDC1Q8IVP5 155 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 LIN37Q96GY3 246 aaPredicted RBP13.85□□□□□ -0.19
TNF-208ENST00000449264 MIEF1Q9NQG6 463 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 ARL8BQ9NVJ2 186 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 SLC39A1Q9NY26 324 aa13.85□□□□□ -0.19
TNF-208ENST00000449264 PISDQ9UG56 409 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms