RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 HPDP32754 393 aaPredicted RBP13.85□□□□□ -0.19
PRKDC-203ENST00000432581 HNMTP50135 292 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 GPR143P51810 404 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 CDKL1Q00532 357 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 PPP1R7Q15435 360 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 KRTAP21-3Q3LHN1 58 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 TEDDM1Q5T9Z0 273 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 DMRTC2Q8IXT2 367 aaPredicted RBP13.85□□□□□ -0.19
PRKDC-203ENST00000432581 ZNF595Q8IYB9 648 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 TMEM132CQ8N3T6 1108 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 ANKRD7Q92527 254 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 SEC16BQ96JE7 1060 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 ZNF559Q9BR84 538 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 AICDAQ9GZX7 198 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 ADAP2Q9NPF8 381 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 PRTFDC1Q9NRG1 225 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 KCMF1Q9P0J7 381 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 KCNN3Q9UGI6 736 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 DNALI1O14645 258 aaPredicted RBP13.84□□□□□ -0.19
PRKDC-203ENST00000432581 B3GALT2O43825 422 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 H2AFYO75367 372 aaKnown RBP13.84□□□□□ -0.19
PRKDC-203ENST00000432581 BANF1O75531 89 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 HOXD4P09016 255 aaPredicted RBP13.84□□□□□ -0.19
PRKDC-203ENST00000432581 ZNF37AP17032 561 aaPredicted RBP13.84□□□□□ -0.19
PRKDC-203ENST00000432581 GNAZP19086 355 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 SAT1P21673 171 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 PGGT1BP53609 377 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 RAB38P57729 211 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 PPIAP62937 165 aaKnown RBP13.84□□□□□ -0.19
PRKDC-203ENST00000432581 PLGLB1Q02325 96 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 PMPCAQ10713 525 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 SLC13A2Q13183 592 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 RUNX2Q13950 521 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 RCN2Q14257 317 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 ELAVL1Q15717 326 aaKnown RBP13.84□□□□□ -0.19
PRKDC-203ENST00000432581 MSS51Q4VC12 460 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 EMC4Q5J8M3 183 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 CES4AQ5XG92 561 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 SLC22A16Q86VW1 577 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.84□□□□□ -0.19
PRKDC-203ENST00000432581 NKAPQ8N5F7 415 aaKnown RBP13.84□□□□□ -0.19
PRKDC-203ENST00000432581 OR2M7Q8NG81 312 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 OR5M3Q8NGP4 307 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 ASB15Q8WXK1 588 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 UCK2Q9BZX2 261 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 DEFB127Q9H1M4 99 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 ZDHHC11Q9H8X9 412 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 SLC17A6Q9P2U8 582 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 ASIC3Q9UHC3 531 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 IKZF3Q9UKT9 509 aa13.84□□□□□ -0.19
PRKDC-203ENST00000432581 OR14I1A6ND48 311 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 NPIPA2E9PIF3 369 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 NPIPA3F8WFD2 350 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 BCKDKO14874 412 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 ERI3O43414 337 aaKnown RBP13.83□□□□□ -0.2
PRKDC-203ENST00000432581 OR2J2O76002 312 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 C1GALT1C1LP0DN25 315 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 PPP2R1BP30154 601 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 ART1P52961 327 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 NUP107P57740 925 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 CCZ1BP86790 482 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 CCZ1P86791 482 aaPredicted RBP13.83□□□□□ -0.2
PRKDC-203ENST00000432581 GXYLT1Q4G148 440 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 NDUFAF5Q5TEU4 345 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 TMIGD1Q6UXZ0 262 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 HSDL2Q6YN16 418 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 GK5Q6ZS86 529 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 TMEM200AQ86VY9 491 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 CCDC71Q8IV32 467 aaPredicted RBP13.83□□□□□ -0.2
PRKDC-203ENST00000432581 IGDCC3Q8IVU1 814 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 LRRC8AQ8IWT6 810 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 KLHDC8AQ8IYD2 350 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 CLYBLQ8N0X4 340 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 KRT78Q8N1N4 520 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 RPRMLQ8N4K4 120 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 ACTRT1Q8TDG2 376 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 CCT6BQ92526 530 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 DAZLQ92904 295 aaKnown RBP13.83□□□□□ -0.2
PRKDC-203ENST00000432581 MS4A6EQ96DS6 147 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 EGFL8Q99944 293 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 PITHD1Q9GZP4 211 aaPredicted RBP13.83□□□□□ -0.2
PRKDC-203ENST00000432581 DEPPQ9NTK1 212 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 MYOTQ9UBF9 498 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 PPP2R2CQ9Y2T4 447 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 OARD1Q9Y530 152 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 CLDN16Q9Y5I7 305 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 CLCA3PQ9Y6N3 262 aa13.83□□□□□ -0.2
PRKDC-203ENST00000432581 PINLYPA6NC86 204 aa13.82□□□□□ -0.2
PRKDC-203ENST00000432581 LRIT2A6NDA9 550 aa13.82□□□□□ -0.2
PRKDC-203ENST00000432581 NPEPPSL1A6NEC2 478 aa13.82□□□□□ -0.2
PRKDC-203ENST00000432581 TMEM200CA6NKL6 621 aa13.82□□□□□ -0.2
PRKDC-203ENST00000432581 FIGNL2A6NMB9 653 aa13.82□□□□□ -0.2
PRKDC-203ENST00000432581 FAM166BA8MTA8 275 aa13.82□□□□□ -0.2
PRKDC-203ENST00000432581 TGFBR3LH3BV60 316 aa13.82□□□□□ -0.2
PRKDC-203ENST00000432581 CDC7O00311 574 aa13.82□□□□□ -0.2
PRKDC-203ENST00000432581 NRDCO43847 1150 aa13.82□□□□□ -0.2
PRKDC-203ENST00000432581 PRKNO60260 465 aaPredicted RBP13.82□□□□□ -0.2
PRKDC-203ENST00000432581 OR6B1O95007 311 aa13.82□□□□□ -0.2
PRKDC-203ENST00000432581 IFNA16P05015 189 aa13.82□□□□□ -0.2
PRKDC-203ENST00000432581 ACVR2AP27037 513 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms