RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 KIR2DS5A0A0G2JLQ3 304 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 A0A0G2JNG1 304 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 H3BN98 237 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 KIR2DS3K7RE56 304 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 RSL1D1O76021 490 aaKnown RBP10.23□□□□□ -0.77
TCOF1-204ENST00000427724 KLK1P06870 262 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 PVRP15151 417 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 LRP8Q14114 963 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 KIR2DS5Q14953 304 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 FAM174BQ3ZCQ3 159 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 INTS11Q5TA45 600 aaKnown RBP10.23□□□□□ -0.77
TCOF1-204ENST00000427724 CES4AQ5XG92 561 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 DHRS13Q6UX07 377 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 SYT13Q7L8C5 426 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 CLEC1AQ8NC01 280 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 ANKRD49Q8WVL7 239 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 PHF21AQ96BD5 680 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 BIRC8Q96P09 236 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 YIPF4Q9BSR8 244 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 RASSF1Q9NS23 344 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 ZCCHC3Q9NUD5 404 aaKnown RBP10.23□□□□□ -0.77
TCOF1-204ENST00000427724 TMEM30AQ9NV96 361 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 COL6A6A6NMZ7 2263 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 FADS2O95864 444 aaKnown RBP10.23□□□□□ -0.77
TCOF1-204ENST00000427724 PRSS56P0CW18 603 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 CSNK2A2P19784 350 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-204ENST00000427724 HK3P52790 923 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 PNLIPRP1P54315 467 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 DNAJB13P59910 316 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 E2F1Q01094 437 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 TAF13Q15543 124 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 NSDHLQ15738 373 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 WSCD2Q2TBF2 565 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 DCAF12Q5T6F0 453 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 DCDC5Q6ZRR9 648 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 USP30Q70CQ3 517 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 C12orf40Q86WS4 652 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 SAMD14Q8IZD0 417 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-204ENST00000427724 STX19Q8N4C7 294 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 AMER2Q8N7J2 671 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 MGME1Q9BQP7 344 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 TFB2MQ9H5Q4 396 aaKnown RBP10.23□□□□□ -0.77
TCOF1-204ENST00000427724 PRTFDC1Q9NRG1 225 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 ACTR3BQ9P1U1 418 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 VPS4AQ9UN37 437 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 SLC9A8Q9Y2E8 581 aa10.23□□□□□ -0.77
TCOF1-204ENST00000427724 PIEZO1Q92508 2521 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 BTN3A3O00478 584 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 KERAO60938 352 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 AGTR2P50052 363 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 RPP38P78345 283 aaKnown RBP10.22□□□□□ -0.77
TCOF1-204ENST00000427724 PRR5P85299 388 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 MADCAM1Q13477 382 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 MBOAT1Q6ZNC8 495 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 DPPA4Q7L190 304 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 SPNS2Q8IVW8 549 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 SVOPQ8N4V2 548 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 ELF4Q99607 663 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-204ENST00000427724 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.22□□□□□ -0.77
TCOF1-204ENST00000427724 MAP4K5Q9Y4K4 846 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 POM121BA6NF01 834 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 FAM220BPB1ANY3 271 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 YKT6O15498 198 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 F3P13726 295 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 ACRV1P26436 265 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 ASMTP46597 345 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 BMXP51813 675 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 CDKN2DP55273 166 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 NEK10Q6ZWH5 1172 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 RAB43Q86YS6 212 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 SLC15A3Q8IY34 581 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 PDPRQ8NCN5 879 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 SAMHD1Q9Y3Z3 626 aaKnown RBP10.22□□□□□ -0.77
TCOF1-204ENST00000427724 PCDHGA7Q9Y5G6 932 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 DOCK1Q14185 1865 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 PNMA8CA0A1B0GUJ8 204 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 ELOVL7A1L3X0 281 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 SOCS2O14508 198 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 SDHBP21912 280 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 MPIP34949 423 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 FEN1P39748 380 aaKnown RBP10.22□□□□□ -0.77
TCOF1-204ENST00000427724 HNMTP50135 292 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 UNC50Q53HI1 259 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 ANXA8L1Q5VT79 327 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 CLIP4Q8N3C7 705 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 OR5AR1Q8NGP9 310 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 CMTM7Q96FZ5 175 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 VN1R3Q9BXE9 311 aa10.22□□□□□ -0.77
TCOF1-204ENST00000427724 C5orf67F2Z3F1 127 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 PCDH7O60245 1069 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 ARHGEF15O94989 841 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 ADPRHP54922 357 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 ERVK-8P63133 956 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 ZXDAP98168 799 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 BTBD16Q32M84 506 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 PLEKHS1Q5SXH7 462 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 SCML4Q8N228 414 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 PEX11GQ96HA9 241 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 NODALQ96S42 347 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 SPATA5L1Q9BVQ7 753 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms