RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 ANKRD39Q53RE8 183 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAM69AQ5T7M9 428 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 ALG1LQ6GMV1 187 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 RGS7BPQ6MZT1 257 aaPredicted RBP5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 ESRP1Q6NXG1 681 aaKnown RBP5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 PAMR1Q6UXH9 720 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 WASH2PQ6VEQ5 465 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 DPH6Q7L8W6 267 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 SSX9Q7RTT3 188 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 GPR142Q7Z601 462 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 ENTHD1Q8IYW4 607 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 FTMTQ8N4E7 242 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 OXR1Q8N573 874 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 EID2Q8N6I1 236 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF655Q8N720 491 aaPredicted RBP5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 AGBL3Q8NEM8 1001 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 PROKR2Q8NFJ6 384 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR8D4Q8NGM9 314 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR56B4Q8NH76 319 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 RPLP0P6Q8NHW5 317 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 CEP76Q8TAP6 659 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 STAG3L4Q8TBR4 150 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 POF1BQ8WVV4 589 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 ST8SIA2Q92186 375 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 ULK4Q96C45 1275 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC25A36Q96CQ1 311 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 ORAI1Q96D31 301 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 PHYHIPLQ96FC7 376 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 LRRC46Q96FV0 321 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMEM176AQ96HP8 235 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 ITCHQ96J02 903 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 SENP8Q96LD8 212 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 LURAP1Q96LR2 239 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMEM68Q96MH6 324 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 LINC00052Q96N35 136 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 GPR78Q96P69 363 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 CSPG4P5Q96PW8 444 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 GFM1Q96RP9 751 aaKnown RBP5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 PIP5K1AQ99755 562 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 SSX3Q99909 188 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 INPP5KQ9BT40 448 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 SPATA5L1Q9BVQ7 753 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 RBCK1Q9BYM8 510 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 ALX4Q9H161 411 aaPredicted RBP5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 DEFB129Q9H1M3 183 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 KCNH6Q9H252 994 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 MIXL1Q9H2W2 232 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 CRISPLD1Q9H336 500 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 TFB2MQ9H5Q4 396 aaKnown RBP5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 DDX31Q9H8H2 851 aaKnown RBP5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 HEXA-AS1Q9H8Q6 139 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 APOBEC3GQ9HC16 384 aaKnown RBP5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 ABCB9Q9NP78 766 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 BRD7Q9NPI1 651 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 SERHLQ9NQF3 203 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 PRMT8Q9NR22 394 aaPredicted RBP5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 GSN-AS1Q9NRJ2 163 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 DUSP22Q9NRW4 184 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 SNTG1Q9NSN8 517 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZFP57Q9NU63 452 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 ASIC5Q9NY37 505 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 TREM2Q9NZC2 230 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 PDP1Q9P0J1 537 aaPredicted RBP5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 NLKQ9UBE8 527 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 ACSL6Q9UKU0 697 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF451Q9Y4E5 1061 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 NPTNQ9Y639 398 aa5.4□□□□□ -1.54
VTI1BP4-201ENST00000427516 QSER1Q2KHR3 1735 aa5.4□□□□□ -1.55
VTI1BP4-201ENST00000427516 GREB1LQ9C091 1923 aaPredicted RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 A0A0B4J293 547 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 UBE2QL1A1L167 161 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 ISM1B1AKI9 464 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 LINC00587B1AMM8 73 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 DISC1C4P0D8 188 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 DNASE2O00115 360 aaPredicted RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 ARVCFO00192 962 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 SELENOFO60613 162 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 KERAO60938 352 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 WBP4O75554 376 aaKnown RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 AP2A2O94973 939 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR4F21O95013 312 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 POP4O95707 220 aaKnown RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 HRGP04196 525 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 SULT1A3P0DMM9 295 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 SULT1A4P0DMN0 295 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC2A1P11166 492 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 CYP4B1P13584 511 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 CPN1P15169 458 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 DPEP1P16444 411 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 HDCP19113 662 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 CD53P19397 219 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 PAICSP22234 425 aaKnown RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 NFYAP23511 347 aaPredicted RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 HOXA6P31267 233 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 FGF9P31371 208 aaPredicted RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 S100A11P31949 105 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 NOS2P35228 1153 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 SOX11P35716 441 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 RPS19P39019 145 aaKnown RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC1A3P43003 542 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms