RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 MFSD4BQ5TF39 518 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 ADNP2Q6IQ32 1131 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 PWWP2BQ6NUJ5 590 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 GALNT18Q6P9A2 607 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 IKBIPQ70UQ0 350 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 GPR180Q86V85 440 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 LIX1Q8N485 282 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 VPS37AQ8NEZ2 397 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 APIPQ96GX9 242 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 PRR11Q96HE9 360 aaPredicted RBP9.58□□□□□ -0.88
CD44-207ENST00000425428 C3orf30Q96M34 536 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 C1orf50Q9BV19 199 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 LYRM4Q9HD34 91 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 ENAMQ9NRM1 1142 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 HEY2Q9UBP5 337 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 FBXW2Q9UKT8 454 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 PADI2Q9Y2J8 665 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 SEC16AO15027 2179 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 CEP250Q9BV73 2442 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 CASC3O15234 703 aaKnown RBP9.58□□□□□ -0.88
CD44-207ENST00000425428 PRMT3O60678 531 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 KIAA0754O94854 1291 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 ETHE1O95571 254 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 NTRK1P04629 796 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 DRD2P14416 443 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 ITIH1P19827 911 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 PRPS1L1P21108 318 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 BSGP35613 385 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 ID4P47928 161 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 ACTN3Q08043 901 aaPredicted RBP9.58□□□□□ -0.88
CD44-207ENST00000425428 C2orf80Q0P641 193 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 TBL3Q12788 808 aaKnown RBP9.58□□□□□ -0.88
CD44-207ENST00000425428 SQLEQ14534 574 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 MAPRE2Q15555 327 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 DPY19L1Q2PZI1 675 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 C6orf163Q5TEZ5 329 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 ATG14Q6ZNE5 492 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 SAMD14Q8IZD0 417 aaPredicted RBP9.58□□□□□ -0.88
CD44-207ENST00000425428 NATD1Q8N6N6 113 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 GLB1L3Q8NCI6 653 aaPredicted RBP9.58□□□□□ -0.88
CD44-207ENST00000425428 OR9A4Q8NGU2 314 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 OR2T11Q8NH01 316 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 MR1Q95460 341 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 NXPE2Q96DL1 559 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 LRRC37BQ96QE4 947 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 OR52B2Q96RD2 323 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 EBF4Q9BQW3 602 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 EBPLQ9BY08 206 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 NRSN2Q9GZP1 204 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 MKKSQ9NPJ1 570 aaPredicted RBP9.58□□□□□ -0.88
CD44-207ENST00000425428 THSD1Q9NS62 852 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 ASIC5Q9NY37 505 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 DLL3Q9NYJ7 618 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 IFT80Q9P2H3 777 aaPredicted RBP9.58□□□□□ -0.88
CD44-207ENST00000425428 G3BP2Q9UN86 482 aaKnown RBP9.58□□□□□ -0.88
CD44-207ENST00000425428 MAP4K5Q9Y4K4 846 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 PCDHGA3Q9Y5H0 932 aa9.58□□□□□ -0.88
CD44-207ENST00000425428 C1orf226A1L170 272 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 FAM149AA5PLN7 773 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 SGK494L7N484 410 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 RTCAO00442 366 aaKnown RBP9.57□□□□□ -0.88
CD44-207ENST00000425428 ZNF195O14628 629 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 STK17BO94768 372 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 JUNP05412 331 aaKnown RBP9.57□□□□□ -0.88
CD44-207ENST00000425428 CERS1P27544 350 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 ADSLP30566 484 aaPredicted RBP9.57□□□□□ -0.88
CD44-207ENST00000425428 ALDH9A1P49189 494 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 ATP4BP51164 291 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 KCNK10P57789 538 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 TAS2R50P59544 299 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 HYAL2Q12891 473 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 FOXC1Q12948 553 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 BIKQ13323 160 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 DSG2Q14126 1118 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 C1orf189Q5VU69 101 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 C6orf15Q6UXA7 325 aaPredicted RBP9.57□□□□□ -0.88
CD44-207ENST00000425428 DGLUCYQ7Z3D6 616 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 PIGWQ7Z7B1 504 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 ESX1Q8N693 406 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 BMPERQ8N8U9 685 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 C10orf82Q8WW14 230 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 VPS50Q96JG6 964 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 LRFN5Q96NI6 719 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 CATSPER2Q96P56 530 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 APMAPQ9HDC9 416 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 PRDM7Q9NQW5 492 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 WDR70Q9NW82 654 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 TMEM45AQ9NWC5 275 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 DHCR7Q9UBM7 475 aaKnown RBP9.57□□□□□ -0.88
CD44-207ENST00000425428 TRPC4Q9UBN4 977 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 ZNF282Q9UDV7 671 aaPredicted RBP9.57□□□□□ -0.88
CD44-207ENST00000425428 NXT1Q9UKK6 140 aaKnown RBP9.57□□□□□ -0.88
CD44-207ENST00000425428 PADI1Q9ULC6 663 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 B3GALT1Q9Y5Z6 326 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 ZNF780BQ9Y6R6 833 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 SCN2AQ99250 2005 aa9.57□□□□□ -0.88
CD44-207ENST00000425428 A0A0A6YYD5 115 aa9.56□□□□□ -0.88
CD44-207ENST00000425428 STMND1H3BQB6 276 aa9.56□□□□□ -0.88
CD44-207ENST00000425428 MEN1O00255 615 aa9.56□□□□□ -0.88
CD44-207ENST00000425428 SLC22A2O15244 555 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms