RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SYNDIG1LA6NDD5 238 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 OR2W5A6NFC9 320 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 LRRC14BA6NHZ5 514 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 SMIM23A6NLE4 172 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 C4orf51C9J302 202 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 H0YIV9 168 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 E2F3O00716 465 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 DNAJB6O75190 326 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 SH3BGRLO75368 114 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 TGFB1P01137 390 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 GSTA1P08263 222 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 CERS1P27544 350 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 SSR2P43308 183 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 SLCO1A2P46721 670 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 TAS2R50P59544 299 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 ARG2P78540 354 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 MFAP5Q13361 173 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 CPSF6Q16630 551 aaKnown RBP eCLIP10.29□□□□□ -0.76
USP49-204ENST00000423567 KHDRBS2Q5VWX1 349 aaKnown RBP10.29□□□□□ -0.76
USP49-204ENST00000423567 SLC6A19Q695T7 634 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 PLAG1Q6DJT9 500 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 TTC19Q6DKK2 380 aaPredicted RBP10.29□□□□□ -0.76
USP49-204ENST00000423567 ADNP2Q6IQ32 1131 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 PAPD4Q6PIY7 484 aaKnown RBP10.29□□□□□ -0.76
USP49-204ENST00000423567 LINC00696Q6ZRV3 163 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 ATCAYQ86WG3 371 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 CYP4X1Q8N118 509 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 SIRT6Q8N6T7 355 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 RBMXL3Q8N7X1 1067 aaKnown RBP10.29□□□□□ -0.76
USP49-204ENST00000423567 HUS1BQ8NHY5 278 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 DNAJB14Q8TBM8 379 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 BRIX1Q8TDN6 353 aaKnown RBP10.29□□□□□ -0.76
USP49-204ENST00000423567 TSLPQ969D9 159 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 CNDP1Q96KN2 507 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 IMMP1LQ96LU5 166 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 LMF1Q96S06 567 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 WDR77Q9BQA1 342 aaPredicted RBP10.29□□□□□ -0.76
USP49-204ENST00000423567 AICDAQ9GZX7 198 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 EPB41L4BQ9H329 900 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 MAP10Q9P2G4 905 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 DCDC2Q9UHG0 476 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 PCTPQ9UKL6 214 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 TSC22D4Q9Y3Q8 395 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 MMACHCQ9Y4U1 282 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 PCSK5Q92824 1860 aa10.29□□□□□ -0.76
USP49-204ENST00000423567 CFAP46Q8IYW2 2715 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 BLACEA4D250 179 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 A8MT66 165 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 A8MUI8 341 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 FAM227AF5H4B4 570 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 GOLGA8RI6L899 631 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 CDH16O75309 829 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 GLRA3O75311 464 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 WISP1O95388 367 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 OTCP00480 354 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 ITGAMP11215 1152 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 PTX3P26022 381 aaPredicted RBP10.28□□□□□ -0.76
USP49-204ENST00000423567 TSFMP43897 325 aaKnown RBP10.28□□□□□ -0.76
USP49-204ENST00000423567 CCT5P48643 541 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 EFNA3P52797 238 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 MLLT10P55197 1068 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 LIM2P55344 173 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 HSD17B7P56937 341 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 VSNL1P62760 191 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 IFFO1Q0D2I5 559 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 IFT88Q13099 833 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 SLC13A2Q13183 592 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 RUNX2Q13950 521 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 ZRSR2Q15696 482 aaKnown RBP10.28□□□□□ -0.76
USP49-204ENST00000423567 C10orf62Q5T681 223 aaPredicted RBP10.28□□□□□ -0.76
USP49-204ENST00000423567 DEPDC1Q5TB30 811 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 ABHD17BQ5VST6 288 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 EMBQ6PCB8 327 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 TDRPQ86YL5 185 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 SLC22A9Q8IVM8 553 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 ZNF595Q8IYB9 648 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 IQCKQ8N0W5 287 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 SHISA5Q8N114 240 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 L3MBTL4Q8NA19 623 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 M1APQ8TC57 530 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 CPT1CQ8TCG5 803 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 RGMAQ96B86 450 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 QRFPRQ96P65 431 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 MTERF1Q99551 399 aaKnown RBP10.28□□□□□ -0.76
USP49-204ENST00000423567 NTMT1Q9BV86 223 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 OR51B5Q9H339 312 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 ELOVL6Q9H5J4 265 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 KCNK13Q9HB14 408 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 LYRM4Q9HD34 91 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 SEMA4BQ9NPR2 832 aaPredicted RBP10.28□□□□□ -0.76
USP49-204ENST00000423567 DMRT3Q9NQL9 472 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 PRTFDC1Q9NRG1 225 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 TMEM216Q9P0N5 145 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 LUZP4Q9P127 313 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 ABI3Q9P2A4 366 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 DAPP1Q9UN19 280 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 RNF11Q9Y3C5 154 aa10.28□□□□□ -0.76
USP49-204ENST00000423567 PYCARD-AS1I3L0S3 204 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 SAP18O00422 153 aaKnown RBP10.27□□□□□ -0.77
USP49-204ENST00000423567 RTCAO00442 366 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms