RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 NUP107P57740 925 aa15.68■□□□□ 0.1
UPF3AP3-201ENST00000420996 RUNX2Q13950 521 aa15.68■□□□□ 0.1
UPF3AP3-201ENST00000420996 GXYLT1Q4G148 440 aa15.68■□□□□ 0.1
UPF3AP3-201ENST00000420996 OR2M7Q8NG81 312 aa15.68■□□□□ 0.1
UPF3AP3-201ENST00000420996 GRK7Q8WTQ7 553 aa15.68■□□□□ 0.1
UPF3AP3-201ENST00000420996 GAL3ST3Q96A11 431 aa15.68■□□□□ 0.1
UPF3AP3-201ENST00000420996 CERS2Q96G23 380 aa15.68■□□□□ 0.1
UPF3AP3-201ENST00000420996 MS4A14Q96JA4 679 aa15.68■□□□□ 0.1
UPF3AP3-201ENST00000420996 FAR2Q96K12 515 aa15.68■□□□□ 0.1
UPF3AP3-201ENST00000420996 PBKQ96KB5 322 aa15.68■□□□□ 0.1
UPF3AP3-201ENST00000420996 ZDHHC11Q9H8X9 412 aa15.68■□□□□ 0.1
UPF3AP3-201ENST00000420996 PRTFDC1Q9NRG1 225 aa15.68■□□□□ 0.1
UPF3AP3-201ENST00000420996 HPF1Q9NWY4 346 aa15.68■□□□□ 0.1
UPF3AP3-201ENST00000420996 SLC22A14Q9Y267 594 aa15.68■□□□□ 0.1
UPF3AP3-201ENST00000420996 CLDN16Q9Y5I7 305 aa15.68■□□□□ 0.1
UPF3AP3-201ENST00000420996 TMEM200CA6NKL6 621 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 TGFBR3LH3BV60 316 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 ACOT7O00154 380 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 PRKNO60260 465 aaPredicted RBP15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 OR2J2O76002 312 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 PPP2R1BP30154 601 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 PLGLB1Q02325 96 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 PPP1R3AQ16821 1122 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 XKR6Q5GH73 641 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 TEDDM1Q5T9Z0 273 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 FAM45BPQ6NSW5 357 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 TMEM200AQ86VY9 491 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 CLYBLQ8N0X4 340 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 OR5M3Q8NGP4 307 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 FAM45AQ8TCE6 357 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 ASB15Q8WXK1 588 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 NAP1L3Q99457 506 aaPredicted RBP15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 ADAP2Q9NPF8 381 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 MYOTQ9UBF9 498 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 IKZF3Q9UKT9 509 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 SPG11Q96JI7 2443 aa15.67■□□□□ 0.1
UPF3AP3-201ENST00000420996 PINLYPA6NC86 204 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 OR14I1A6ND48 311 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 SYNDIG1LA6NDD5 238 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 NPIPA2E9PIF3 369 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 NPIPA3F8WFD2 350 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 KLK8O60259 260 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 H2AFYO75367 372 aaKnown RBP15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 BANF1O75531 89 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 SAT1P21673 171 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 ACVR2AP27037 513 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 DNAJA1P31689 397 aaKnown RBP15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 RAB38P57729 211 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 SLC13A2Q13183 592 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 MSS51Q4VC12 460 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 IL20RBQ6UXL0 311 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 C16orf47Q6ZP98 133 aaPredicted RBP15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 SLC22A16Q86VW1 577 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 ZNF595Q8IYB9 648 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 TMEM132CQ8N3T6 1108 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 TMEM52Q8NDY8 209 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 TTLQ8NG68 377 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 ANKRD7Q92527 254 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 MS4A6EQ96DS6 147 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 TTTY12Q9BZ98 90 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 LIN28AQ9H9Z2 209 aaKnown RBP15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 PPANQ9NQ55 473 aaKnown RBP15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 PNPLA3Q9NST1 481 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 SLC17A6Q9P2U8 582 aa15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 MRPS33Q9Y291 106 aaKnown RBP15.66■□□□□ 0.1
UPF3AP3-201ENST00000420996 MTORP42345 2549 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 A0A0G2JN53 185 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 LRIT2A6NDA9 550 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 FAM166BA8MTA8 275 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 BCKDKO14874 412 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 ERI3O43414 337 aaKnown RBP15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 GLSO94925 669 aaPredicted RBP15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 OR6B1O95007 311 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 IGHG3P01860 377 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 C1GALT1C1LP0DN25 315 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 HNRNPH1P31943 449 aaKnown RBP15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 FNTAP49354 379 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 HNRNPFP52597 415 aaKnown RBP15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 CCZ1BP86790 482 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 CCZ1P86791 482 aaPredicted RBP15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 CDKL1Q00532 357 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 MYBPHQ13203 477 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 ELAVL1Q15717 326 aaKnown RBP15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 NDUFAF5Q5TEU4 345 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 TMIGD1Q6UXZ0 262 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 HSDL2Q6YN16 418 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 IGDCC3Q8IVU1 814 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 KLHDC8AQ8IYD2 350 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 OR5M9Q8NGP3 310 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 OR10Q1Q8NGQ4 319 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 POM121Q96HA1 1249 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 QRFPRQ96P65 431 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 RASL10BQ96S79 203 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 TTYH2Q9BSA4 534 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 JRKLQ9Y4A0 524 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 CLCA3PQ9Y6N3 262 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 NF1P21359 2839 aa15.65■□□□□ 0.1
UPF3AP3-201ENST00000420996 A0A088AWK7 358 aa15.64■□□□□ 0.09
UPF3AP3-201ENST00000420996 FIGNL2A6NMB9 653 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms