RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 COLEC10Q9Y6Z7 277 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 COMMD3-BMI1R4GMX3 469 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 UNC80Q8N2C7 3258 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 MYO1GB0I1T2 1018 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 VILLO15195 856 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 SERPIND1P05546 499 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 FPR1P21462 350 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 DNAJA1P31689 397 aaKnown RBP14.25□□□□□ -0.13
CBX3-202ENST00000396386 SSR2P43308 183 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 RXRGP48443 463 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 ALDH9A1P49189 494 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 PRIM2P49643 509 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 CRYBA2P53672 197 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 KCNAB2Q13303 367 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 ELOAQ14241 798 aaKnown RBP14.25□□□□□ -0.13
CBX3-202ENST00000396386 SLC5A12Q1EHB4 618 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 ZNF630Q2M218 657 aaPredicted RBP14.25□□□□□ -0.13
CBX3-202ENST00000396386 TMEM35AQ53FP2 167 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 ENPP7Q6UWV6 458 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 RNF130Q86XS8 419 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 PLD3Q8IV08 490 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 NFKBIDQ8NI38 313 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 CREB3L4Q8TEY5 395 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 OR5P2Q8WZ92 322 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 NLNQ9BYT8 704 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 ZNF576Q9H609 170 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 NEUROD4Q9HD90 331 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 CD93Q9NPY3 652 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 TMEM184CQ9NVA4 438 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 SCHIP1Q9P0W5 487 aaPredicted RBP14.25□□□□□ -0.13
CBX3-202ENST00000396386 TMEFF2Q9UIK5 374 aaPredicted RBP14.25□□□□□ -0.13
CBX3-202ENST00000396386 CD207Q9UJ71 328 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 MAP4K5Q9Y4K4 846 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 PRICKLE3O43900 615 aaPredicted RBP14.25□□□□□ -0.13
CBX3-202ENST00000396386 LCMT2O60294 686 aaKnown RBP14.25□□□□□ -0.13
CBX3-202ENST00000396386 ETS2P15036 469 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 PRKACGP22612 351 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 HNRNPA2B1P22626 353 aaKnown RBP14.25□□□□□ -0.13
CBX3-202ENST00000396386 IGFBP5P24593 272 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 HTR1BP28222 390 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 NDUFS1P28331 727 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 BCL6P41182 706 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 SH3BGRP55822 239 aaPredicted RBP14.25□□□□□ -0.13
CBX3-202ENST00000396386 TRA2BP62995 288 aaKnown RBP14.25□□□□□ -0.13
CBX3-202ENST00000396386 ZC3H12BQ5HYM0 836 aaKnown RBP14.25□□□□□ -0.13
CBX3-202ENST00000396386 ANKRD34AQ69YU3 496 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 THAP5Q7Z6K1 395 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 SLC30A8Q8IWU4 369 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 OR2L3Q8NG85 312 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 DOHHQ9BU89 302 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 AMBRA1Q9C0C7 1298 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 CXorf36Q9H7Y0 433 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 DDX31Q9H8H2 851 aaKnown RBP14.25□□□□□ -0.13
CBX3-202ENST00000396386 REEP1Q9H902 201 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 ANGPT4Q9Y264 503 aa14.25□□□□□ -0.13
CBX3-202ENST00000396386 SAMHD1Q9Y3Z3 626 aaKnown RBP14.25□□□□□ -0.13
CBX3-202ENST00000396386 A0A0A6YYD5 115 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 A0A1W2PPC1 479 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 TCRBV21S2A2A0A5A6 115 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 LRRC72A6NJI9 287 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 C2CD4DB7Z1M9 353 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 HAT1O14929 419 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 TMPRSS11DO60235 418 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 DPM1O60762 260 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 APBB3O95704 486 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 ARAFP10398 606 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 ITGAMP11215 1152 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 CMPK1P30085 196 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 PEBP1P30086 187 aaKnown RBP14.24□□□□□ -0.13
CBX3-202ENST00000396386 ACSL1P33121 698 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 PIGAP37287 484 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 CASP9P55211 416 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 KCNJ10P78508 379 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 COL19A1Q14993 1142 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 OR4C11Q6IEV9 310 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 CCDC80Q76M96 950 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 UBE3DQ7Z6J8 389 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 DCP2Q8IU60 420 aaKnown RBP14.24□□□□□ -0.13
CBX3-202ENST00000396386 NRBF2Q96F24 287 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 TMEM121BQ9BXQ6 578 aaPredicted RBP14.24□□□□□ -0.13
CBX3-202ENST00000396386 EPS8L2Q9H6S3 715 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 C1GALT1Q9NS00 363 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 PTTG2Q9NZH5 202 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 TBC1D29Q9UFV1 150 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 CA5BQ9Y2D0 317 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 PADI2Q9Y2J8 665 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 SNX8Q9Y5X2 465 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 REV3LO60673 3130 aa14.24□□□□□ -0.13
CBX3-202ENST00000396386 PRAMEF33A0A0G2JMD5 474 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 ENO4A6NNW6 628 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 H0Y8X5 98 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 GCM2O75603 506 aaPredicted RBP14.23□□□□□ -0.13
CBX3-202ENST00000396386 DIRAS1O95057 198 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 HLCSP50747 726 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 TPMTP51580 245 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 MANFP55145 182 aaKnown RBP14.23□□□□□ -0.13
CBX3-202ENST00000396386 DSTNP60981 165 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 ESRRGP62508 458 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 CDK6Q00534 326 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 EEF1A2Q05639 463 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms