RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 DPY19L1Q2PZI1 675 aa18.21■□□□□ 0.51
CCDC50-202ENST00000392456 ZBTB37Q5TC79 503 aa18.21■□□□□ 0.51
CCDC50-202ENST00000392456 Q6ZS52 159 aa18.21■□□□□ 0.51
CCDC50-202ENST00000392456 NLRP8Q86W28 1048 aa18.21■□□□□ 0.51
CCDC50-202ENST00000392456 PHYKPLQ8IUZ5 450 aa18.21■□□□□ 0.51
CCDC50-202ENST00000392456 DCBLD1Q8N8Z6 715 aa18.21■□□□□ 0.51
CCDC50-202ENST00000392456 WDR48Q8TAF3 677 aa18.21■□□□□ 0.51
CCDC50-202ENST00000392456 FAM3CQ92520 227 aa18.21■□□□□ 0.51
CCDC50-202ENST00000392456 ZHX1-C8orf76Q96EF9 292 aa18.21■□□□□ 0.51
CCDC50-202ENST00000392456 ZNF385DQ9H6B1 395 aa18.21■□□□□ 0.51
CCDC50-202ENST00000392456 SOX17Q9H6I2 414 aaPredicted RBP18.21■□□□□ 0.51
CCDC50-202ENST00000392456 PRDM6Q9NQX0 595 aa18.21■□□□□ 0.51
CCDC50-202ENST00000392456 PRKAB1Q9Y478 270 aa18.21■□□□□ 0.51
CCDC50-202ENST00000392456 AGAP5A6NIR3 686 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 ST8SIA5O15466 376 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 FFAR2O15552 330 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 CRHBPP24387 322 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 ALDH4A1P30038 563 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 PREPP48147 710 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 DEFA1P59665 94 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 DEFA3P59666 94 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 FAPQ12884 760 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 EFR3AQ14156 821 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 Q3ZCU0 254 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 PTCRAQ6ISU1 281 aaPredicted RBP18.21■□□□□ 0.5
CCDC50-202ENST00000392456 PNCKQ6P2M8 343 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 XKRXQ6PP77 449 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 CYP2R1Q6VVX0 501 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 ZNF765Q7L2R6 523 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 SKA2Q8WVK7 121 aaPredicted RBP18.21■□□□□ 0.5
CCDC50-202ENST00000392456 KCNA7Q96RP8 456 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 EIF2B4Q9UI10 523 aaKnown RBP18.21■□□□□ 0.5
CCDC50-202ENST00000392456 ZNF225Q9UK10 706 aa18.21■□□□□ 0.5
CCDC50-202ENST00000392456 GON4LQ3T8J9 2241 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 TAPBPO15533 448 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 HTR1AP08908 422 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 PBLDP30039 288 aaPredicted RBP18.2■□□□□ 0.5
CCDC50-202ENST00000392456 GDF5P43026 501 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 GNPDA1P46926 289 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 PRIM2P49643 509 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 ZXDCQ2QGD7 858 aaPredicted RBP18.2■□□□□ 0.5
CCDC50-202ENST00000392456 TTLL9Q3SXZ7 439 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 ZNF547Q8IVP9 402 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 CANT1Q8WVQ1 401 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 SLC7A6Q92536 515 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 MRGPRX1Q96LB2 322 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 LILRB5O75023 590 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 ALBP02768 609 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 DNTTP04053 509 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 RPS17P08708 135 aaKnown RBP18.2■□□□□ 0.5
CCDC50-202ENST00000392456 PDHA2P29803 388 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 MAT2AP31153 395 aaKnown RBP18.2■□□□□ 0.5
CCDC50-202ENST00000392456 ELOAQ14241 798 aaKnown RBP18.2■□□□□ 0.5
CCDC50-202ENST00000392456 RBM48Q5RL73 367 aaKnown RBP18.2■□□□□ 0.5
CCDC50-202ENST00000392456 PHC2Q8IXK0 858 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 ARL6IP6Q8N6S5 226 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 KLHL6Q8WZ60 621 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 CDADC1Q9BWV3 514 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 FAM126AQ9BYI3 521 aaPredicted RBP18.2■□□□□ 0.5
CCDC50-202ENST00000392456 C2orf42Q9NWW7 574 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 GMPR2Q9P2T1 348 aaKnown RBP18.2■□□□□ 0.5
CCDC50-202ENST00000392456 PCTPQ9UKL6 214 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 PRELID3BQ9Y3B1 194 aa18.2■□□□□ 0.5
CCDC50-202ENST00000392456 E2F3O00716 465 aa18.19■□□□□ 0.5
CCDC50-202ENST00000392456 INMTO95050 263 aa18.19■□□□□ 0.5
CCDC50-202ENST00000392456 ZNF8P17098 575 aaPredicted RBP18.19■□□□□ 0.5
CCDC50-202ENST00000392456 GGT5P36269 586 aa18.19■□□□□ 0.5
CCDC50-202ENST00000392456 PRLHRP49683 370 aa18.19■□□□□ 0.5
CCDC50-202ENST00000392456 AP1S2P56377 157 aa18.19■□□□□ 0.5
CCDC50-202ENST00000392456 PSME3P61289 254 aa18.19■□□□□ 0.5
CCDC50-202ENST00000392456 VBP1P61758 197 aa18.19■□□□□ 0.5
CCDC50-202ENST00000392456 GPAT3Q53EU6 434 aa18.19■□□□□ 0.5
CCDC50-202ENST00000392456 R3HCC1LQ7Z5L2 792 aaKnown RBP18.19■□□□□ 0.5
CCDC50-202ENST00000392456 RAB44Q7Z6P3 723 aaPredicted RBP18.19■□□□□ 0.5
CCDC50-202ENST00000392456 C12orf57Q99622 126 aa18.19■□□□□ 0.5
CCDC50-202ENST00000392456 REXO4Q9GZR2 422 aaKnown RBP18.19■□□□□ 0.5
CCDC50-202ENST00000392456 MID1IP1Q9NPA3 183 aa18.19■□□□□ 0.5
CCDC50-202ENST00000392456 AGPAT4Q9NRZ5 378 aa18.19■□□□□ 0.5
CCDC50-202ENST00000392456 OR1A2Q9Y585 309 aa18.19■□□□□ 0.5
CCDC50-202ENST00000392456 PTGDR2Q9Y5Y4 395 aa18.19■□□□□ 0.5
CCDC50-202ENST00000392456 EI24O14681 340 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 AP2A2O94973 939 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 TPMTP51580 245 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 ADPRHP54922 357 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 MRPS21P82921 87 aaKnown RBP18.18■□□□□ 0.5
CCDC50-202ENST00000392456 TNK1Q13470 666 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 TDGQ13569 410 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 INPP5AQ14642 412 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 ANKS6Q68DC2 871 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 FCRLBQ6BAA4 426 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 DOK6Q6PKX4 331 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 KRT77Q7Z794 578 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 MCFD2Q8NI22 146 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 ASB11Q8WXH4 323 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 SIPA1Q96FS4 1042 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 NPAS2Q99743 824 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 EVA1BQ9NVM1 165 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 TINAGQ9UJW2 476 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 PDE10AQ9Y233 779 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 OARD1Q9Y530 152 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms