RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 METTL21AQ8WXB1 218 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 GAL3ST3Q96A11 431 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 C8orf44Q96CB5 159 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 MS4A6EQ96DS6 147 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 SEC16BQ96JE7 1060 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 VPS50Q96JG6 964 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 NSUN5Q96P11 429 aaKnown RBP8.72□□□□□ -1.01
HMGN1-202ENST00000380747 F2RL3Q96RI0 385 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 MESP1Q9BRJ9 268 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 SLC25A23Q9BV35 468 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 TGIF2Q9GZN2 237 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 AICDAQ9GZX7 198 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 RHBGQ9H310 441 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 NOL11Q9H8H0 719 aaKnown RBP8.72□□□□□ -1.01
HMGN1-202ENST00000380747 SEMA4BQ9NPR2 832 aaPredicted RBP8.72□□□□□ -1.01
HMGN1-202ENST00000380747 ATP13A2Q9NQ11 1180 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 COPG2Q9UBF2 871 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 PCTPQ9UKL6 214 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 ANKRD12Q6UB98 2062 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 A0A088AWK7 358 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 LRIT2A6NDA9 550 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 C4orf51C9J302 202 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 AGPSO00116 658 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 PSMD12O00232 456 aaPredicted RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 SAP18O00422 153 aaKnown RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 SOCS6O14544 535 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 COPEO14579 308 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 OR7A17O14581 309 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 CDC123O75794 336 aaPredicted RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 CLDN9O95484 217 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 TGFB1P01137 390 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 RPS17P08708 135 aaKnown RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 SMIM10L1P0DMW3 83 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 ACPPP15309 386 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 TSPAN8P19075 237 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 NR1D1P20393 614 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 ZNF10P21506 573 aaPredicted RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 ATP5F1P24539 256 aaPredicted RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 ITGA3P26006 1051 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 SERPINB1P30740 379 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 HPDP32754 393 aaPredicted RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 CCT5P48643 541 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 CCNG1P51959 295 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 CDH13P55290 713 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 PHEXP78562 749 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 EEF1A2Q05639 463 aaKnown RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 PCDH1Q08174 1060 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 TGM3Q08188 693 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 RAPSNQ13702 412 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 E2F2Q14209 437 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 RASA2Q15283 850 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 CPSF6Q16630 551 aaKnown RBP eCLIP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 C11orf91Q3C1V1 193 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 LACTB2Q53H82 288 aaPredicted RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 LIPJQ5W064 366 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 TTC19Q6DKK2 380 aaPredicted RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 METTL2BQ6P1Q9 378 aaKnown RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 RPS27LQ71UM5 84 aaKnown RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 LAS2Q8IYD9 372 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 RIBC1Q8N443 379 aaPredicted RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 RNF175Q8N4F7 328 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 TMEM151AQ8N4L1 468 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 CCDC63Q8NA47 563 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 OR2L5Q8NG80 312 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 OR7G3Q8NG95 312 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 OR11G2Q8NGC1 345 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 OR52B6Q8NGF0 335 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 ZNF483Q8TF39 744 aaPredicted RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 ZNF473Q8WTR7 871 aaKnown RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 NACC2Q96BF6 587 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 REPS1Q96D71 796 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 SMIM10Q96HG1 83 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 MS4A8Q9BY19 250 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 REXO4Q9GZR2 422 aaKnown RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 COPS7BQ9H9Q2 264 aaPredicted RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 ZNF160Q9HCG1 818 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 TIMMDC1Q9NPL8 285 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 RAB21Q9UL25 225 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 G3BP2Q9UN86 482 aaKnown RBP8.71□□□□□ -1.02
HMGN1-202ENST00000380747 PLAAQ9Y263 795 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 TP53TG5Q9Y2B4 290 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 RNF11Q9Y3C5 154 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 ICE1Q9Y2F5 2266 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 HEATR5BQ9P2D3 2071 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 CSMD1Q96PZ7 3565 aa8.71□□□□□ -1.02
HMGN1-202ENST00000380747 FER1L5A0AVI2 2057 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 NSG1A0A0A6YYJ2 146 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 OR2W5A6NFC9 320 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 K7EM74 188 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 B3GALT2O43825 422 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 DLX3O60479 287 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 UGDHO60701 494 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 B4GALT2O60909 372 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 SUPT7LO94864 414 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 TBX6O95947 436 aaPredicted RBP8.7□□□□□ -1.02
HMGN1-202ENST00000380747 TUBBP07437 444 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 FHP07954 510 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 C8orf89P0DMQ9 161 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 MYL2P10916 166 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 RNH1P13489 461 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms