RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 CCZ1P86791 482 aaPredicted RBP21.51■■□□□ 1.03
U2AF1-202ENST00000380276 BMPR2Q13873 1038 aa21.51■■□□□ 1.03
U2AF1-202ENST00000380276 RUNX2Q13950 521 aa21.51■■□□□ 1.03
U2AF1-202ENST00000380276 IL20RBQ6UXL0 311 aa21.51■■□□□ 1.03
U2AF1-202ENST00000380276 CLNKQ7Z7G1 428 aa21.51■■□□□ 1.03
U2AF1-202ENST00000380276 LRRC8AQ8IWT6 810 aa21.51■■□□□ 1.03
U2AF1-202ENST00000380276 ARMC10Q8N2F6 343 aa21.51■■□□□ 1.03
U2AF1-202ENST00000380276 PSD4Q8NDX1 1056 aa21.51■■□□□ 1.03
U2AF1-202ENST00000380276 ZNF559Q9BR84 538 aa21.51■■□□□ 1.03
U2AF1-202ENST00000380276 AICDAQ9GZX7 198 aa21.51■■□□□ 1.03
U2AF1-202ENST00000380276 ZNF223Q9UK11 482 aaPredicted RBP21.51■■□□□ 1.03
U2AF1-202ENST00000380276 MRPS33Q9Y291 106 aaKnown RBP21.51■■□□□ 1.03
U2AF1-202ENST00000380276 YARS2Q9Y2Z4 477 aaKnown RBP21.51■■□□□ 1.03
U2AF1-202ENST00000380276 C2CD3Q4AC94 2353 aa21.5■■□□□ 1.03
U2AF1-202ENST00000380276 NPIPA2E9PIF3 369 aa21.5■■□□□ 1.03
U2AF1-202ENST00000380276 NPIPA3F8WFD2 350 aa21.5■■□□□ 1.03
U2AF1-202ENST00000380276 PRKNO60260 465 aaPredicted RBP21.5■■□□□ 1.03
U2AF1-202ENST00000380276 RAB38P57729 211 aa21.5■■□□□ 1.03
U2AF1-202ENST00000380276 PMPCAQ10713 525 aa21.5■■□□□ 1.03
U2AF1-202ENST00000380276 SLBPQ14493 270 aaKnown RBP eCLIP21.5■■□□□ 1.03
U2AF1-202ENST00000380276 TERF2Q15554 542 aa21.5■■□□□ 1.03
U2AF1-202ENST00000380276 SPNS3Q6ZMD2 512 aa21.5■■□□□ 1.03
U2AF1-202ENST00000380276 GALNT7Q86SF2 657 aa21.5■■□□□ 1.03
U2AF1-202ENST00000380276 SCUBE1Q8IWY4 988 aa21.5■■□□□ 1.03
U2AF1-202ENST00000380276 NPDC1Q9NQX5 325 aaPredicted RBP21.5■■□□□ 1.03
U2AF1-202ENST00000380276 POLQO75417 2590 aa21.5■■□□□ 1.03
U2AF1-202ENST00000380276 A0A088AWK7 358 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 MYOCOSA0A1B0GUC4 107 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 G3V3Y1 287 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 B3GALT2O43825 422 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 OR2J2O76002 312 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 ZNF37AP17032 561 aaPredicted RBP21.49■■□□□ 1.03
U2AF1-202ENST00000380276 ZNF10P21506 573 aaPredicted RBP21.49■■□□□ 1.03
U2AF1-202ENST00000380276 ELK3P41970 407 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 NR0B1P51843 470 aaKnown RBP21.49■■□□□ 1.03
U2AF1-202ENST00000380276 HNRNPFP52597 415 aaKnown RBP21.49■■□□□ 1.03
U2AF1-202ENST00000380276 PLA2G16P53816 162 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 NUP107P57740 925 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 MYBPHQ13203 477 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 ZNF460Q14592 562 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 PPP1R3AQ16821 1122 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 C18orf21Q32NC0 220 aaPredicted RBP21.49■■□□□ 1.03
U2AF1-202ENST00000380276 TRMT10BQ6PF06 316 aaKnown RBP21.49■■□□□ 1.03
U2AF1-202ENST00000380276 KLHDC8AQ8IYD2 350 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 NKAPQ8N5F7 415 aaKnown RBP21.49■■□□□ 1.03
U2AF1-202ENST00000380276 ACBD4Q8NC06 268 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 TMEM52Q8NDY8 209 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 OR5M9Q8NGP3 310 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 OR10Q1Q8NGQ4 319 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 LILRB4Q8NHJ6 448 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 SEC16BQ96JE7 1060 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 TREX2Q9BQ50 279 aaPredicted RBP21.49■■□□□ 1.03
U2AF1-202ENST00000380276 COPS7BQ9H9Q2 264 aaPredicted RBP21.49■■□□□ 1.03
U2AF1-202ENST00000380276 ADAP2Q9NPF8 381 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 DEPPQ9NTK1 212 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 CELSR1Q9NYQ6 3014 aa21.49■■□□□ 1.03
U2AF1-202ENST00000380276 CCDC168Q8NDH2 2452 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 PINLYPA6NC86 204 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 TGFBR3LH3BV60 316 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 WWP2O00308 870 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 C1GALT1C1LP0DN25 315 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 GNAZP19086 355 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 HNRNPH1P31943 449 aaKnown RBP21.48■■□□□ 1.03
U2AF1-202ENST00000380276 GDF5P43026 501 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 HSD17B7P56937 341 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 TMIGD1Q6UXZ0 262 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 PDIK1LQ8N165 341 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 TMEM132CQ8N3T6 1108 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 TTLQ8NG68 377 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 OR2M7Q8NG81 312 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 MS4A6EQ96DS6 147 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 PDLIM5Q96HC4 596 aaKnown RBP21.48■■□□□ 1.03
U2AF1-202ENST00000380276 PWWP2AQ96N64 755 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 OSBPL9Q96SU4 736 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 NPLQ9BXD5 320 aaPredicted RBP21.48■■□□□ 1.03
U2AF1-202ENST00000380276 DDX47Q9H0S4 455 aaKnown RBP21.48■■□□□ 1.03
U2AF1-202ENST00000380276 CTNNAL1Q9UBT7 734 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 OARD1Q9Y530 152 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 CLCA3PQ9Y6N3 262 aa21.48■■□□□ 1.03
U2AF1-202ENST00000380276 ANKDD1BA6NHY2 528 aa21.47■■□□□ 1.03
U2AF1-202ENST00000380276 NCF1BA6NI72 391 aaPredicted RBP21.47■■□□□ 1.03
U2AF1-202ENST00000380276 NCF1CA8MVU1 366 aaPredicted RBP21.47■■□□□ 1.03
U2AF1-202ENST00000380276 DIAPH2O60879 1101 aa21.47■■□□□ 1.03
U2AF1-202ENST00000380276 KRT38O76015 456 aa21.47■■□□□ 1.03
U2AF1-202ENST00000380276 TOXO94900 526 aa21.47■■□□□ 1.03
U2AF1-202ENST00000380276 OR6B1O95007 311 aa21.47■■□□□ 1.03
U2AF1-202ENST00000380276 NCF1P14598 390 aaPredicted RBP21.47■■□□□ 1.03
U2AF1-202ENST00000380276 ART1P52961 327 aa21.47■■□□□ 1.03
U2AF1-202ENST00000380276 ZNF585AQ6P3V2 769 aa21.47■■□□□ 1.03
U2AF1-202ENST00000380276 TRIM40Q6P9F5 258 aa21.47■■□□□ 1.03
U2AF1-202ENST00000380276 ACAD11Q709F0 780 aa21.47■■□□□ 1.03
U2AF1-202ENST00000380276 GPALPP1Q8IXQ4 340 aa21.47■■□□□ 1.03
U2AF1-202ENST00000380276 KRT78Q8N1N4 520 aa21.47■■□□□ 1.03
U2AF1-202ENST00000380276 ACTRT1Q8TDG2 376 aa21.47■■□□□ 1.03
U2AF1-202ENST00000380276 PLSCR2Q9NRY7 297 aa21.47■■□□□ 1.03
U2AF1-202ENST00000380276 PNPLA3Q9NST1 481 aa21.47■■□□□ 1.03
U2AF1-202ENST00000380276 A0A0G2JMM0 328 aa21.46■■□□□ 1.03
U2AF1-202ENST00000380276 FAM95CA0A1B0GW59 222 aa21.46■■□□□ 1.03
U2AF1-202ENST00000380276 A0A1W2PPB8 328 aa21.46■■□□□ 1.03
U2AF1-202ENST00000380276 A0A1W2PRS3 328 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms