RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 KCNC2Q96PR1 638 aa13.61□□□□□ -0.23
SHROOM1-203ENST00000378679 RBCK1Q9BYM8 510 aa13.61□□□□□ -0.23
SHROOM1-203ENST00000378679 EPB41L1Q9H4G0 881 aa13.61□□□□□ -0.23
SHROOM1-203ENST00000378679 CMTM6Q9NX76 183 aa13.61□□□□□ -0.23
SHROOM1-203ENST00000378679 CA5BQ9Y2D0 317 aa13.61□□□□□ -0.23
SHROOM1-203ENST00000378679 CAB39Q9Y376 341 aaPredicted RBP13.61□□□□□ -0.23
SHROOM1-203ENST00000378679 PCDHB3Q9Y5E6 796 aa13.61□□□□□ -0.23
SHROOM1-203ENST00000378679 C1orf105O95561 183 aa13.61□□□□□ -0.23
SHROOM1-203ENST00000378679 FADS2O95864 444 aaKnown RBP13.61□□□□□ -0.23
SHROOM1-203ENST00000378679 HRH2P25021 359 aa13.61□□□□□ -0.23
SHROOM1-203ENST00000378679 RCAN2Q14206 197 aa13.61□□□□□ -0.23
SHROOM1-203ENST00000378679 INAQ16352 499 aa13.61□□□□□ -0.23
SHROOM1-203ENST00000378679 REEP3Q6NUK4 255 aa13.61□□□□□ -0.23
SHROOM1-203ENST00000378679 NODALQ96S42 347 aa13.61□□□□□ -0.23
SHROOM1-203ENST00000378679 TOR4AQ9NXH8 423 aa13.61□□□□□ -0.23
SHROOM1-203ENST00000378679 CLCA3PQ9Y6N3 262 aa13.61□□□□□ -0.23
SHROOM1-203ENST00000378679 MICAL3Q7RTP6 2002 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 RGS10O43665 173 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 UGDHO60701 494 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 KCNJ13O60928 360 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 ALOX5P09917 674 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 CTHP32929 405 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 OR1E2P47887 323 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 HTRA4P83105 476 aaPredicted RBP13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 OR5P2Q8WZ92 322 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 SMURF2Q9HAU4 748 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 C5AR2Q9P296 337 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 POLR1DQ9Y2S0 133 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 HSD17B1P14061 328 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 DGUOKQ16854 277 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 CYP27C1Q4G0S4 372 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 FAM109BQ6ICB4 259 aaPredicted RBP13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 ZNF551Q7Z340 670 aaPredicted RBP13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 GALNT10Q86SR1 603 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 SLC30A8Q8IWU4 369 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 TOE1Q96GM8 510 aaKnown RBP13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 HHIPQ96QV1 700 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 GTPBP2Q9BX10 602 aaKnown RBP13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 NUAK2Q9H093 628 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 CDC14AQ9UNH5 594 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 HLA-DQA2P01906 255 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 XKP51811 444 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 UAP1L1Q3KQV9 507 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 KHDRBS2Q5VWX1 349 aaKnown RBP13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 FAM92BQ6ZTR7 304 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 KCTD8Q6ZWB6 473 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 SLCO6A1Q86UG4 719 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 RANBP3LQ86VV4 465 aaPredicted RBP13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 KLHDC8AQ8IYD2 350 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 ZNF683Q8IZ20 524 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 OR4K14Q8NGD5 310 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 PROKR1Q8TCW9 393 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 UBASH3BQ8TF42 649 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 VAPAQ9P0L0 249 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 SARDHQ9UL12 918 aa13.6□□□□□ -0.23
SHROOM1-203ENST00000378679 PABPC4LP0CB38 370 aaKnown RBP13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 ZNF182P17025 639 aaPredicted RBP13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 RPS26P62854 115 aaKnown RBP13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 GJD3Q8N144 294 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 OBP2AQ9NY56 170 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 GPN3Q9UHW5 284 aaPredicted RBP13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 PCDHB14Q9Y5E9 798 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 VNN2O95498 520 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 FPR1P21462 350 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 HK3P52790 923 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 ZNF311Q5JNZ3 666 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 FAAH2Q6GMR7 532 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 USP53Q70EK8 1073 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 ZNF765Q7L2R6 523 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 ADGRG6Q86SQ4 1221 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 ZZZ3Q8IYH5 903 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 OR56A1Q8NGH5 318 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 PIGXQ8TBF5 258 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 TAMM41Q96BW9 452 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 OMA1Q96E52 524 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 ZHX1-C8orf76Q96EF9 292 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 RNFT2Q96EX2 444 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 MYADMQ96S97 322 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 COQ7Q99807 217 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 P2RY12Q9H244 342 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 C11orf16Q9NQ32 467 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 KLHL1Q9NR64 748 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 PLXNB2O15031 1838 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 PNMA8CA0A1B0GUJ8 204 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 FAM170BA6NMN3 283 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 CHURC1-FNTBB4DL54 471 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 REM1O75628 298 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 MATN1P21941 496 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 OXTRP30559 389 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 RABIFP47224 123 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 DCDC1P59894 354 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 CDKL1Q00532 357 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 HHEXQ03014 270 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 ALG1LQ6GMV1 187 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 ASTLQ6HA08 431 aaPredicted RBP13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 RTL4Q6ZR62 310 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 Q6ZSR9 355 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 PLPP6Q8IY26 295 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 C16orf78Q8WTQ4 265 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms