RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ALG11Q2TAA5 492 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 ANKRD34AQ69YU3 496 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 OR4C11Q6IEV9 310 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 Q6ZS52 159 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 METTL25Q8N6Q8 603 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 TSPAN14Q8NG11 270 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 OR4E2Q8NGC2 313 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 KLHL31Q9H511 634 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 TEX10Q9NXF1 929 aaPredicted RBP18.66■□□□□ 0.58
HDAC1-201ENST00000373548 USE1Q9NZ43 259 aa18.66■□□□□ 0.58
HDAC1-201ENST00000373548 E2F6O75461 281 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 AQP1P29972 269 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 SHMT2P34897 504 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 SOAT1P35610 550 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 GRK3P35626 688 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 CHI3L1P36222 383 aaPredicted RBP18.65■□□□□ 0.58
HDAC1-201ENST00000373548 SRP54P61011 504 aaKnown RBP18.65■□□□□ 0.58
HDAC1-201ENST00000373548 VLDLRP98155 873 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 HYAL2Q12891 473 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 TEAD4Q15561 434 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 GCNT6Q5T4J0 391 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 KIAA1614Q5VZ46 1190 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 PATL1Q86TB9 770 aaKnown RBP18.65■□□□□ 0.58
HDAC1-201ENST00000373548 AMIGO1Q86WK6 493 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 RNF130Q86XS8 419 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 LCN9Q8WX39 176 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 C17orf62Q9BQA9 187 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 ASPSCR1Q9BZE9 553 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 CXorf36Q9H7Y0 433 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 C1GALT1Q9NS00 363 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 OR6C2Q9NZP2 312 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 C5AR2Q9P296 337 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 KLHL20Q9Y2M5 609 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 U3KQV3 271 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 ARHGEF17Q96PE2 2063 aaPredicted RBP18.65■□□□□ 0.58
HDAC1-201ENST00000373548 A0A0A6YYD5 115 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 A6NCN8 305 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 hCG_2039718K7EN88 272 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 NOBOXO60393 691 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 CHRM5P08912 532 aaPredicted RBP18.65■□□□□ 0.58
HDAC1-201ENST00000373548 NDUFS1P28331 727 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 CMPK1P30085 196 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 YPEL5P62699 121 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 FADDQ13158 208 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 SMAD4Q13485 552 aaKnown RBP18.65■□□□□ 0.58
HDAC1-201ENST00000373548 TTC33Q6PID6 262 aaPredicted RBP18.65■□□□□ 0.58
HDAC1-201ENST00000373548 ZNF793Q6ZN11 406 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 PJA1Q8NG27 643 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 RBM4BQ9BQ04 359 aaKnown RBP18.65■□□□□ 0.58
HDAC1-201ENST00000373548 MACROD1Q9BQ69 325 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 RBM4Q9BWF3 364 aaKnown RBP18.65■□□□□ 0.58
HDAC1-201ENST00000373548 C6orf106Q9H6K1 298 aaPredicted RBP18.65■□□□□ 0.58
HDAC1-201ENST00000373548 EPS8L2Q9H6S3 715 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 SYNPO2LQ9H987 977 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 CLK4Q9HAZ1 481 aaKnown RBP18.65■□□□□ 0.58
HDAC1-201ENST00000373548 MAP4K5Q9Y4K4 846 aa18.65■□□□□ 0.58
HDAC1-201ENST00000373548 TRBV23OR9-2A0A075B6M9 112 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 ISM1B1AKI9 464 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 TMEM229AB2RXF0 380 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 C4orf51C9J302 202 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 PDPK1O15530 556 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 SEC24DO94855 1032 aaPredicted RBP18.64■□□□□ 0.57
HDAC1-201ENST00000373548 FKBP9O95302 570 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 FABP3P05413 133 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 PRKACGP22612 351 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 PAX7P23759 505 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 SLC19A1P41440 591 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 SSR2P43308 183 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 GSTM5P46439 218 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 ADPRMQ3LIE5 342 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 TMEM35AQ53FP2 167 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 OR2T5Q6IEZ7 315 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 ZNF425Q6IV72 752 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 TRIM40Q6P9F5 258 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 CHRDL2Q6WN34 429 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 Q6ZSR6 202 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 ZNF786Q8N393 782 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 OR2T29Q8NH02 315 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 TBC1D20Q96BZ9 403 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 RDH12Q96NR8 316 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 SARGQ9BW04 601 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 GRIP2Q9C0E4 1043 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 TMEM38AQ9H6F2 299 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 KLF15Q9UIH9 416 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 AP1M2Q9Y6Q5 423 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 IGHV4-34P06331 123 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 UQCRC2P22695 453 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 AHRP35869 848 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 RBBP4Q09028 425 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 NADK2Q4G0N4 442 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 KCTD21Q4G0X4 260 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 NRROSQ86YC3 692 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 OR5P2Q8WZ92 322 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 UCN3Q969E3 161 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 MSANTD3Q96H12 275 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 ZNF764Q96H86 408 aaPredicted RBP18.64■□□□□ 0.57
HDAC1-201ENST00000373548 TPD52L3Q96J77 140 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 PRO3102Q9H379 93 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 TOR3AQ9H497 397 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 EPB41L1Q9H4G0 881 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms