RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 CRISP3P54108 245 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 ZNF155Q12901 538 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 C1DQ13901 141 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 CAMK1Q14012 370 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 GNA13Q14344 377 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 NNATQ16517 81 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 C6orf120Q7Z4R8 191 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 CADM2Q8N3J6 435 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 ZNF583Q96ND8 569 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 GSDMCQ9BYG8 508 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 SLC6A16Q9GZN6 736 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 CD207Q9UJ71 328 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 GPR34Q9UPC5 381 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 CACNA1EQ15878 2313 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 SPTBP11277 2137 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 NINQ8N4C6 2090 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 TRBV5-4A0A0C4DH59 114 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 MYL12BO14950 172 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 PRMT3O60678 531 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 UGT2B11O75310 529 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 ZNF821O75541 412 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 TRMUO75648 421 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 EGFP01133 1207 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 SAGP10523 405 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 HNRNPA2B1P22626 353 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 POLR2IP36954 125 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 COPZ1P61923 177 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 HBA1P69905 142 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 ATP6AP1Q15904 470 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 XKR7Q5GH72 579 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 DEPDC1Q5TB30 811 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 NDUFAF5Q5TEU4 345 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 KIAA1211LQ6NV74 962 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 SMARCD3Q6STE5 483 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 SLCO4C1Q6ZQN7 724 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 FAM83HQ6ZRV2 1179 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 RNF44Q7L0R7 432 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 WDR53Q7Z5U6 358 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 IQCHQ86VS3 1027 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 COX18Q8N8Q8 333 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 SETD7Q8WTS6 366 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 ART5Q96L15 291 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 FCRL4Q96PJ5 515 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 GAL3ST4Q96RP7 486 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 FAM129BQ96TA1 746 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 NRTNQ99748 197 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 CLMPQ9H6B4 373 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 CLN6Q9NWW5 311 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 TVP23BQ9NYZ1 205 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 KLHL42Q9P2K6 505 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 SERGEFQ9UGK8 458 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 DMTF1Q9Y222 760 aa6.82□□□□□ -1.32
TGFBR3-202ENST00000370399 CPED1A4D0V7 1026 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 CCNB2O95067 398 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 BMP7P18075 431 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 MYL12AP19105 171 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 ITPKBP27987 946 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 SHMT2P34897 504 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 MTAPQ13126 283 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 SUZ12Q15022 739 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 SNAPC1Q16533 368 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 RUNDC3AQ59EK9 446 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 CDKL4Q5MAI5 379 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 TLDC1Q6P9B6 456 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 TMEM107Q6UX40 140 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 UNC5DQ6UXZ4 953 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 ZCCHC7Q8N3Z6 543 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 FAM86B1Q8N7N1 296 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 CNIH3Q8TBE1 160 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 TOE1Q96GM8 510 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 PLA2G2FQ9BZM2 168 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 POLR2J3Q9H1A7 115 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 STARD5Q9NSY2 213 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 APOBEC3BQ9UH17 382 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 ENOPH1Q9UHY7 261 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 GTF2A1LQ9UNN4 478 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 PCDHA9Q9Y5H5 950 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 COMMD3-BMI1R4GMX3 469 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 CNOT1A5YKK6 2376 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 PRAMEF33A0A0G2JMD5 474 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 TCRBV3S1A0A5B6 114 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 CH25HO95992 272 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 LINGO3P0C6S8 592 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 CD247P20963 164 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 MATN1P21941 496 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 IFNGR2P38484 337 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 RANBP1P43487 201 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 DHPSP49366 369 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 CDK9P50750 372 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 XKP51811 444 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 RPL6Q02878 288 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 RPS26P11Q5JNZ5 115 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 REEP3Q6NUK4 255 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 TECPR1Q7Z6L1 1165 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 TMEFF1Q8IYR6 380 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 DEPDC4Q8N2C3 294 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 Q8N9G6 341 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 MRGPRX3Q96LB0 322 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 TEFMQ96QE5 360 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms