RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 CROCCQ5TZA2 2017 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 ABCA12Q86UK0 2595 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 PCNX1Q96RV3 2341 aa11.63□□□□□ -0.55
SGCA-202ENST00000344627 GTF3C1Q12789 2109 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 SAGE2PA6NJ88 616 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 CLDN4O14493 209 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 B3GALT2O43825 422 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 CLDN14O95500 239 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 SMIM10L1P0DMW3 83 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 CD1DP15813 335 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 HNRNPH1P31943 449 aaKnown RBP11.62□□□□□ -0.55
SGCA-202ENST00000344627 HPDP32754 393 aaPredicted RBP11.62□□□□□ -0.55
SGCA-202ENST00000344627 GPX6P59796 221 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 ETF1P62495 437 aaKnown RBP11.62□□□□□ -0.55
SGCA-202ENST00000344627 SLC13A2Q13183 592 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 KBTBD12Q3ZCT8 623 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 SLC25A25Q6KCM7 469 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 TRIM40Q6P9F5 258 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 TBC1D1Q86TI0 1168 aaPredicted RBP11.62□□□□□ -0.55
SGCA-202ENST00000344627 FBXO25Q8TCJ0 367 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 FBF1Q8TES7 1133 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 GAL3ST3Q96A11 431 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 TMEM125Q96AQ2 219 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 MS4A6EQ96DS6 147 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 SMIM10Q96HG1 83 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 NPAS2Q99743 824 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 MCMBPQ9BTE3 642 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 DEFB126Q9BYW3 111 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 REXO4Q9GZR2 422 aaKnown RBP11.62□□□□□ -0.55
SGCA-202ENST00000344627 TSPAN10Q9H1Z9 355 aaPredicted RBP11.62□□□□□ -0.55
SGCA-202ENST00000344627 ALG9Q9H6U8 611 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 TRIM45Q9H8W5 580 aaPredicted RBP11.62□□□□□ -0.55
SGCA-202ENST00000344627 NECTIN3Q9NQS3 549 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 PRTFDC1Q9NRG1 225 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 GPRC5BQ9NZH0 403 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 LRFN1Q9P244 771 aa11.62□□□□□ -0.55
SGCA-202ENST00000344627 LRIT2A6NDA9 550 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 SUPT3HB4E1H0 165 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 C4orf51C9J302 202 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 E9PLN8 166 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 FCHO1O14526 889 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 PRRG2O14669 202 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 SUPT3HO75486 399 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 MYO1DO94832 1006 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 SP1P08047 785 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 PRF1P14222 555 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 STX2P32856 288 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 GMPRP36959 345 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 SLC7A5Q01650 507 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 IRF8Q02556 426 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 TGM3Q08188 693 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 CBLBQ13191 982 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 LAPTM5Q13571 262 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 RUNX2Q13950 521 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 TRADDQ15628 312 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 PDK4Q16654 411 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 PAGE2BQ5JRK9 111 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 GALNTL5Q7Z4T8 443 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 CMC1Q7Z7K0 106 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 ARMC10Q8N2F6 343 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 FAM47BQ8NA70 645 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 STAG3L4Q8TBR4 150 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 ELP5Q8TE02 316 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 KIAA1191Q96A73 305 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 MTFMTQ96DP5 389 aaKnown RBP11.61□□□□□ -0.55
SGCA-202ENST00000344627 LURAP1Q96LR2 239 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 FRMD6Q96NE9 622 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 VKORC1Q9BQB6 163 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 TMEM79Q9BSE2 394 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 AICDAQ9GZX7 198 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 NT5DC2Q9H857 520 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 NMRAL1Q9HBL8 299 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 SLC24A3Q9HC58 644 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 IGSF5Q9NSI5 407 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 RYDENQ9NUL5 291 aaKnown RBP11.61□□□□□ -0.55
SGCA-202ENST00000344627 FBXW2Q9UKT8 454 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 MRPS33Q9Y291 106 aaKnown RBP11.61□□□□□ -0.55
SGCA-202ENST00000344627 MEMO1Q9Y316 297 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 MMACHCQ9Y4U1 282 aa11.61□□□□□ -0.55
SGCA-202ENST00000344627 TRBV11-1A0A0K0K1C0 115 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 MYOCOSA0A1B0GUC4 107 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 TCRBV16S1A1N1A0A5B0 115 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 NPIPA5E9PKD4 350 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 ASNA1O43681 348 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 SH3BGRLO75368 114 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 CLEC3AO75596 197 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 WISP3O95389 354 aaPredicted RBP11.6□□□□□ -0.55
SGCA-202ENST00000344627 IFNA16P05015 189 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 PCNAP12004 261 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 TFEBP19484 476 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 GSTM2P28161 218 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 TPP2P29144 1249 aaPredicted RBP11.6□□□□□ -0.55
SGCA-202ENST00000344627 CRABP2P29373 138 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 TRHRP34981 398 aaPredicted RBP11.6□□□□□ -0.55
SGCA-202ENST00000344627 GGT5P36269 586 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 CYB561P49447 251 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 CKAP4Q07065 602 aaKnown RBP11.6□□□□□ -0.55
SGCA-202ENST00000344627 CHIT1Q13231 466 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 DOC2AQ14183 400 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 TERF2Q15554 542 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms