RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 OR2L5Q8NG80 312 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 TMIGD2Q96BF3 282 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 COQ8BQ96D53 544 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 PGAP3Q96FM1 320 aaPredicted RBP13.24□□□□□ -0.29
RTN4-202ENST00000337526 TBL1XR1Q9BZK7 514 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 IGSF5Q9NSI5 407 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 GPN3Q9UHW5 284 aaPredicted RBP13.24□□□□□ -0.29
RTN4-202ENST00000337526 ZNF840PA6NDX5 716 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 BOLA2-SMG1P6H3BVE0 249 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 TLX3O43711 291 aaPredicted RBP13.24□□□□□ -0.29
RTN4-202ENST00000337526 HSD3B1P14060 373 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 GM2AP17900 193 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 HSD3B2P26439 372 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 GCAP28676 217 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 EXOC3L2Q2M3D2 409 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 SLC27A4Q6P1M0 643 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 CELF5Q8N6W0 485 aaKnown RBP13.24□□□□□ -0.29
RTN4-202ENST00000337526 OR8J1Q8NGP2 316 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 BPIFB1Q8TDL5 484 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 FEVQ99581 238 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 PIP5K1AQ99755 562 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 B3GNT4Q9C0J1 378 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 IRF2BPLQ9H1B7 796 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 OR51I1Q9H343 314 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 ENAMQ9NRM1 1142 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 SPEF1Q9Y4P9 236 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 TPD52L2O43399 206 aaKnown RBP13.24□□□□□ -0.29
RTN4-202ENST00000337526 STC2O76061 302 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 APOL3O95236 402 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 FGF4P08620 206 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 ALPPL2P10696 532 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 HLA-EP13747 358 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 GGT1P19440 569 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 OR3A3P47888 321 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 OR3A2P47893 321 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 GFOD2Q3B7J2 385 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 ZNF367Q7RTV3 350 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 SLC22A15Q8IZD6 547 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 OR51G2Q8NGK0 314 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 TM9SF2Q99805 663 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 PRRG4Q9BZD6 226 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 CENPMQ9NSP4 180 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 ISPDA4D126 451 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 SLC35F4A4IF30 521 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 PRMT2P55345 433 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 SPHARQ15513 63 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 SLC36A3Q495N2 470 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 ZNF627Q7L945 461 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 STX12Q86Y82 276 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 CCDC116Q8IYX3 515 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 C15orf40Q8WUR7 153 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 OR5P2Q8WZ92 322 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 C14orf119Q9NWQ9 140 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 INMT-MINDY4F8WBC2 141 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 SLC16A5O15375 505 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 RBMXL2O75526 392 aaKnown RBP13.23□□□□□ -0.29
RTN4-202ENST00000337526 IL3P08700 152 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 ATF4P18848 351 aaPredicted RBP13.23□□□□□ -0.29
RTN4-202ENST00000337526 CXCR1P25024 350 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 GSTM2P28161 218 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 GHRHRQ02643 423 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 LMAN2Q12907 356 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 TEAD2Q15562 447 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 NCEH1Q6PIU2 408 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 MAMDC4Q6UXC1 1216 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 VTCN1Q7Z7D3 282 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 IRF7Q92985 503 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 IGSF21Q96ID5 467 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 GSTO2Q9H4Y5 243 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 WDR6Q9NNW5 1121 aaKnown RBP13.23□□□□□ -0.29
RTN4-202ENST00000337526 FBXL12Q9NXK8 326 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 NDRG2Q9UN36 371 aaKnown RBP13.23□□□□□ -0.29
RTN4-202ENST00000337526 EXOSC1Q9Y3B2 195 aaKnown RBP13.23□□□□□ -0.29
RTN4-202ENST00000337526 INSL6Q9Y581 213 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 PCDHGB5Q9Y5G0 923 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 I3L521 148 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 FBP2O00757 339 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 EDIL3O43854 480 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 GRIA2P42262 883 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 FAM189BP81408 668 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 CD47Q08722 323 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 GALNT10Q86SR1 603 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 TSPYL5Q86VY4 417 aaPredicted RBP13.23□□□□□ -0.29
RTN4-202ENST00000337526 PTERQ96BW5 349 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 SLC6A15Q9H2J7 730 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 SLCO3A1Q9UIG8 710 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 A8MV72 311 aaPredicted RBP13.23□□□□□ -0.29
RTN4-202ENST00000337526 K7ERQ8 282 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 MT-ND5P03915 603 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 CSN2P05814 226 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 PAGE3Q5JUK9 113 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 CCDC107Q8WV48 283 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 MAGIXQ9H6Y5 334 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 Q9N2J8 555 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 MAU2Q9Y6X3 613 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 LTBP3Q9NS15 1303 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 VILLO15195 856 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 MPC1LP0DKB6 136 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 CRISP1P54107 249 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 RAB2AP61019 212 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms