RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 ZNF682O95780 498 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 IL9P15248 144 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 VAC14Q08AM6 782 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 GPR18Q14330 331 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 COX20Q5RI15 118 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 FAM180BQ6P0A1 224 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 TBPL2Q6SJ96 375 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 ZNF793Q6ZN11 406 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 OR10Q1Q8NGQ4 319 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 FLVCR1-AS1Q8TAF5 88 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 OR5P2Q8WZ92 322 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 TFAP2CQ92754 450 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 ZNF764Q96H86 408 aaPredicted RBP20.23■□□□□ 0.83
ATG4D-201ENST00000309469 ORAI3Q9BRQ5 295 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 LTB4R2Q9NPC1 389 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 TEX10Q9NXF1 929 aaPredicted RBP20.23■□□□□ 0.83
ATG4D-201ENST00000309469 ACSL6Q9UKU0 697 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 PCDHGA2Q9Y5H1 932 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 KRBA1A5PL33 1030 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 ERI3O43414 337 aaKnown RBP20.23■□□□□ 0.83
ATG4D-201ENST00000309469 VIPP01282 170 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 PCGF2P35227 344 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 CHI3L1P36222 383 aaPredicted RBP20.23■□□□□ 0.83
ATG4D-201ENST00000309469 ARFIP1P53367 373 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 TOR1AIP1Q5JTV8 583 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 ABHD17CQ6PCB6 329 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 CARM1Q86X55 608 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 C11orf65Q8NCR3 313 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 MAGEE2Q8TD90 523 aaPredicted RBP20.23■□□□□ 0.83
ATG4D-201ENST00000309469 CDX2Q99626 313 aaPredicted RBP20.23■□□□□ 0.83
ATG4D-201ENST00000309469 SYNPO2LQ9H987 977 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 PRDM7Q9NQW5 492 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 RAPGEFL1Q9UHV5 662 aa20.23■□□□□ 0.83
ATG4D-201ENST00000309469 FAM170BA6NMN3 283 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 AXIN1O15169 862 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 PDPK1O15530 556 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 ZW10O43264 779 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 TNFRSF21O75509 655 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 FAM58BPP0C7Q3 252 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 ETFAP13804 333 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 UQCRC2P22695 453 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 RPS9P46781 194 aaKnown RBP20.22■□□□□ 0.83
ATG4D-201ENST00000309469 SLC5A12Q1EHB4 618 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 TJAP1Q5JTD0 557 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 GALNT10Q86SR1 603 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 OR2L5Q8NG80 312 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 OR5AK3PQ8NH89 298 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 PATE1Q8WXA2 126 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 MAL2Q969L2 176 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 KLHDC7BQ96G42 594 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 KCNC2Q96PR1 638 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 OR2A14Q96R47 310 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 SLAMF7Q9NQ25 335 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 CPNE7Q9UBL6 633 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 SLCO1B1Q9Y6L6 691 aa20.22■□□□□ 0.83
ATG4D-201ENST00000309469 C4orf51C9J302 202 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 GNGT2O14610 69 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 KRT75O95678 551 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 CELA2BP08218 269 aaPredicted RBP20.21■□□□□ 0.83
ATG4D-201ENST00000309469 DRD2P14416 443 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 SOAT1P35610 550 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 CLCN2P51788 898 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 MANFP55145 182 aaKnown RBP20.21■□□□□ 0.83
ATG4D-201ENST00000309469 CASP9P55211 416 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 PCBP4P57723 403 aaKnown RBP20.21■□□□□ 0.83
ATG4D-201ENST00000309469 FADDQ13158 208 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 SLC9A5Q14940 896 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 TRIM40Q6P9F5 258 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 CBLL1Q75N03 491 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 EIF3MQ7L2H7 374 aaKnown RBP20.21■□□□□ 0.83
ATG4D-201ENST00000309469 ADHFE1Q8IWW8 467 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 ZCCHC7Q8N3Z6 543 aaKnown RBP20.21■□□□□ 0.83
ATG4D-201ENST00000309469 SLC6A18Q96N87 628 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 ANKRD60Q9BZ19 345 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 FOXQ1Q9C009 403 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 RAD21L1Q9H4I0 556 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 CXorf36Q9H7Y0 433 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 POT1Q9NUX5 634 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 C5AR2Q9P296 337 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 OR6C74A6NCV1 312 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 OR5K4A6NMS3 321 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 TNFAIP8O95379 198 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 CTSEP14091 401 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 UGT2B7P16662 529 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 POLR2CP19387 275 aaPredicted RBP20.21■□□□□ 0.83
ATG4D-201ENST00000309469 HIST1H1TP22492 207 aaPredicted RBP20.21■□□□□ 0.83
ATG4D-201ENST00000309469 FRKP42685 505 aaPredicted RBP20.21■□□□□ 0.83
ATG4D-201ENST00000309469 MAGEA2P43356 314 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 STARD6P59095 220 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 RPS15AP62244 130 aaKnown RBP20.21■□□□□ 0.83
ATG4D-201ENST00000309469 MYBPC1Q00872 1141 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 MERTKQ12866 999 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 SLAMF1Q13291 335 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 SPIDRQ14159 915 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 TEAD4Q15561 434 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.21■□□□□ 0.83
ATG4D-201ENST00000309469 OTUD3Q5T2D3 398 aaPredicted RBP20.21■□□□□ 0.83
ATG4D-201ENST00000309469 GCNT6Q5T4J0 391 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 RNF220Q5VTB9 566 aa20.21■□□□□ 0.83
ATG4D-201ENST00000309469 TAF8Q7Z7C8 310 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms