RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 BEST4Q8NFU0 473 aa14.76□□□□□ -0.05
LEMD3-201ENST00000308330 OR4L1Q8NH43 312 aa14.76□□□□□ -0.05
LEMD3-201ENST00000308330 EBNA1BP2Q99848 306 aaKnown RBP14.76□□□□□ -0.05
LEMD3-201ENST00000308330 GAREM1Q9H706 876 aa14.76□□□□□ -0.05
LEMD3-201ENST00000308330 POM121CA8CG34 1229 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 WASHC1A8K0Z3 465 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 TGM4P49221 684 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 KCNQ1P51787 676 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 VPS26BQ4G0F5 336 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 CERCAMQ5T4B2 595 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 OR56A4Q8NGH8 313 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 TMEM40Q8WWA1 233 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 HMCESQ96FZ2 354 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 CYP2S1Q96SQ9 504 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 IMP3Q9NV31 184 aaKnown RBP14.75□□□□□ -0.05
LEMD3-201ENST00000308330 WNT6Q9Y6F9 365 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 TRBV23OR9-2A0A075B6M9 112 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 GLYATL1P3A0A0U1RQE8 302 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 ARPC2O15144 300 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 C1QBP02746 253 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 MTHFD1P11586 935 aaKnown RBP14.75□□□□□ -0.05
LEMD3-201ENST00000308330 HGFP14210 728 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 MAGEB1P43366 347 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 PITPNAQ00169 270 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 CEACAM7Q14002 265 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 PFKFB4Q16877 469 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 ASTE1Q2TB18 679 aaPredicted RBP14.75□□□□□ -0.05
LEMD3-201ENST00000308330 RPL13AP3Q6NVV1 102 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 RHBDF2Q6PJF5 856 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 VITQ6UXI7 678 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 OR13F1Q8NGS4 319 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 SNX33Q8WV41 574 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 SLC19A3Q9BZV2 496 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 OPA3Q9H6K4 179 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 PMM2O15305 246 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 ATP5F1P24539 256 aaPredicted RBP14.75□□□□□ -0.05
LEMD3-201ENST00000308330 DGKEP52429 567 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 SH3PXD2AQ5TCZ1 1133 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 UNC5BQ8IZJ1 945 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 ADAMTS14Q8WXS8 1223 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 COL21A1Q96P44 957 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 POLR2J2Q9GZM3 115 aaKnown RBP14.75□□□□□ -0.05
LEMD3-201ENST00000308330 NMUR1Q9HB89 426 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 CHRAC1Q9NRG0 131 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 OLAHQ9NV23 265 aa14.75□□□□□ -0.05
LEMD3-201ENST00000308330 PCYT1BQ9Y5K3 369 aaPredicted RBP14.75□□□□□ -0.05
LEMD3-201ENST00000308330 FADS1O60427 444 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 RPL10P27635 214 aaKnown RBP14.74□□□□□ -0.05
LEMD3-201ENST00000308330 AFF3P51826 1226 aaKnown RBP14.74□□□□□ -0.05
LEMD3-201ENST00000308330 PRKCDQ05655 676 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 C5orf46Q6UWT4 87 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.74□□□□□ -0.058e-21■■■■■ 125.3
LEMD3-201ENST00000308330 FAM122BQ7Z309 247 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 SLC22A17Q8WUG5 538 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 HDHD5Q9BXW7 423 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 RHBGQ9H310 441 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 SIX2Q9NPC8 291 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 SAGE1Q9NXZ1 904 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 SLC27A6Q9Y2P4 619 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 TNFRSF17Q02223 184 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 TEAD2Q15562 447 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 CELF5Q8N6W0 485 aaKnown RBP14.74□□□□□ -0.05
LEMD3-201ENST00000308330 FAM83FQ8NEG4 500 aaPredicted RBP14.74□□□□□ -0.05
LEMD3-201ENST00000308330 OR10G6Q8NH81 332 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 SPATA22Q8NHS9 363 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 ACOT11Q8WXI4 607 aaPredicted RBP14.74□□□□□ -0.05
LEMD3-201ENST00000308330 BSCL2Q96G97 398 aaPredicted RBP14.74□□□□□ -0.05
LEMD3-201ENST00000308330 TMEM45AQ9NWC5 275 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 TMEM216Q9P0N5 145 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 TRPC4Q9UBN4 977 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 KAT6AQ92794 2004 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 TIMP1P01033 207 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 MT-ND2P03891 347 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 CDKN2BP42772 138 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 ACSM2AQ08AH3 577 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 ARL13AQ5H913 290 aaPredicted RBP14.74□□□□□ -0.05
LEMD3-201ENST00000308330 COL13A1Q5TAT6 717 aaPredicted RBP14.74□□□□□ -0.05
LEMD3-201ENST00000308330 ACSM2BQ68CK6 577 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 CMTM8Q8IZV2 173 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 CPSF7Q8N684 471 aaKnown RBP14.74□□□□□ -0.05
LEMD3-201ENST00000308330 RPS10P5Q9NQ39 176 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 NANSQ9NR45 359 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 MYEF2Q9P2K5 600 aaKnown RBP14.74□□□□□ -0.05
LEMD3-201ENST00000308330 RIMS3Q9UJD0 308 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 HNRNPLP14866 589 aaKnown RBP eCLIP14.74□□□□□ -0.05
LEMD3-201ENST00000308330 CLCN5P51795 746 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 GRIN2CQ14957 1233 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 PM20D1Q6GTS8 502 aa14.74□□□□□ -0.05
LEMD3-201ENST00000308330 MEIS3P2A8K0S8 358 aa14.73□□□□□ -0.05
LEMD3-201ENST00000308330 PSMD9O00233 223 aa14.73□□□□□ -0.05
LEMD3-201ENST00000308330 SEC22BO75396 215 aa14.73□□□□□ -0.05
LEMD3-201ENST00000308330 CA3P07451 260 aa14.73□□□□□ -0.05
LEMD3-201ENST00000308330 SMIM6P0DI80 62 aa14.73□□□□□ -0.05
LEMD3-201ENST00000308330 BMP2P12643 396 aa14.73□□□□□ -0.05
LEMD3-201ENST00000308330 NR0B1P51843 470 aaKnown RBP14.73□□□□□ -0.05
LEMD3-201ENST00000308330 BCL2L15Q5TBC7 163 aa14.73□□□□□ -0.05
LEMD3-201ENST00000308330 ZNF549Q6P9A3 640 aa14.73□□□□□ -0.05
LEMD3-201ENST00000308330 ZNF227Q86WZ6 799 aa14.73□□□□□ -0.05
LEMD3-201ENST00000308330 BEND7Q8N7W2 519 aaPredicted RBP14.73□□□□□ -0.05
LEMD3-201ENST00000308330 ZNF565Q8N9K5 539 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms