RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 TMEM38AQ9H6F2 299 aa10.09□□□□□ -0.79
CLP1-201ENST00000302731 DNAJB9Q9UBS3 223 aa10.09□□□□□ -0.79
CLP1-201ENST00000302731 SCOCQ9UIL1 159 aa10.09□□□□□ -0.79
CLP1-201ENST00000302731 FBXL21Q9UKT6 434 aa10.09□□□□□ -0.79
CLP1-201ENST00000302731 RNF103-CHMP3A0A140T963 221 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 FAM149AA5PLN7 773 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 SAC3D1A6NKF1 404 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 SOCS2O14508 198 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 TXNDC9O14530 226 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 PDPK1O15530 556 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 NDUFS2O75306 463 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 TNFRSF21O75509 655 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 LYNP07948 512 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 FAM58BPP0C7Q3 252 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 CTSEP14091 401 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 UGT2B7P16662 529 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 HIST1H1TP22492 207 aaPredicted RBP10.08□□□□□ -0.8
CLP1-201ENST00000302731 PLA2G16P53816 162 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 TXNL4AP83876 142 aaKnown RBP10.08□□□□□ -0.8
CLP1-201ENST00000302731 RGS1Q08116 209 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 BIRC2Q13490 618 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 MYBPC3Q14896 1274 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 NRF1Q16656 503 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLP1-201ENST00000302731 TJAP1Q5JTD0 557 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 ZNF793Q6ZN11 406 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 CBLL1Q75N03 491 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 TAF8Q7Z7C8 310 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 APLFQ8IW19 511 aaPredicted RBP10.08□□□□□ -0.8
CLP1-201ENST00000302731 CBR4Q8N4T8 237 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 PSMA8Q8TAA3 256 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 RLN3Q8WXF3 142 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 CIDECQ96AQ7 238 aaPredicted RBP10.08□□□□□ -0.8
CLP1-201ENST00000302731 ZBED6CLQ96FA7 236 aaPredicted RBP10.08□□□□□ -0.8
CLP1-201ENST00000302731 SLC6A18Q96N87 628 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 TEFMQ96QE5 360 aaKnown RBP10.08□□□□□ -0.8
CLP1-201ENST00000302731 C17orf62Q9BQA9 187 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 TPSD1Q9BZJ3 242 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 TRIM4Q9C037 500 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 ROGDIQ9GZN7 287 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 PRDM7Q9NQW5 492 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 ACTR10Q9NZ32 417 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 OAZ3Q9UMX2 235 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 FAF1Q9UNN5 650 aaPredicted RBP10.08□□□□□ -0.8
CLP1-201ENST00000302731 XIRP2A4UGR9 3374 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 FANCMQ8IYD8 2048 aa10.08□□□□□ -0.8
CLP1-201ENST00000302731 A0A1W2PR77 199 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 C2orf74A8MZ97 194 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 UPK1AO00322 258 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 VILLO15195 856 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 ERI3O43414 337 aaKnown RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 CSF2P04141 144 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 SERPIND1P05546 499 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 EFNA1P20827 205 aaPredicted RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 ATP5A1P25705 553 aaKnown RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 CD38P28907 300 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 MAGEA8P43361 318 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 RPS9P46781 194 aaKnown RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 CHN2P52757 468 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 RACK1P63244 317 aaKnown RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 ZP2Q05996 745 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 SIM2Q14190 667 aaPredicted RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 NKG7Q16617 165 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 PRSS53Q2L4Q9 553 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 NHSL2Q5HYW2 709 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 NDUFAF5Q5TEU4 345 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 UGT2A3Q6UWM9 527 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 EIF3MQ7L2H7 374 aaKnown RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 ASPGQ86U10 573 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 FAM20CQ8IXL6 584 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 UBALD2Q8IYN6 164 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 NAGSQ8N159 534 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 SVOPLQ8N434 492 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 FAM86B1Q8N7N1 296 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 FRMD1Q8N878 549 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 ACOT4Q8N9L9 421 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 SLC37A2Q8TED4 501 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 JPH3Q8WXH2 748 aaPredicted RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 GAL3ST3Q96A11 431 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 TM4SF19Q96DZ7 209 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 NEURL3Q96EH8 262 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 IER2Q9BTL4 223 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 NLNQ9BYT8 704 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 FOXQ1Q9C009 403 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 TCEAL2Q9H3H9 227 aaPredicted RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 KLHL31Q9H511 634 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 EPS8L2Q9H6S3 715 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 NTN4Q9HB63 628 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 PRDM9Q9NQV7 894 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 C1GALT1Q9NS00 363 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 GPATCH2Q9NW75 528 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 LYARQ9NX58 379 aaKnown RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 ZSCAN32Q9NX65 697 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 TEX10Q9NXF1 929 aaPredicted RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 APOBEC3BQ9UH17 382 aaKnown RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 ASB4Q9Y574 426 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 V9GYQ6 96 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 SPTBN5Q9NRC6 3674 aaKnown RBP10.07□□□□□ -0.8
CLP1-201ENST00000302731 TRIOBPQ9H2D6 2365 aa10.07□□□□□ -0.8
CLP1-201ENST00000302731 TRBV23OR9-2A0A075B6M9 112 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms