RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 KLHDC10Q6PID8 442 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 GKN2Q86XP6 184 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 MMAAQ8IVH4 418 aaKnown RBP10.04□□□□□ -0.8
CLIP1-201ENST00000302528 UBQLNLQ8IYU4 475 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 KREMEN2Q8NCW0 462 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 LMX1AQ8TE12 382 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 CHPT1Q8WUD6 406 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 PGAM5Q96HS1 289 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 CGREF1Q99674 301 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 OR8D2Q9GZM6 311 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 SSU72Q9NP77 194 aaKnown RBP10.04□□□□□ -0.8
CLIP1-201ENST00000302528 TIGARQ9NQ88 270 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 DNAJC27Q9NZQ0 273 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 SEC14L4Q9UDX3 406 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 ARPC4-TTLL3A0A0A6YYG9 625 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 ANKRD34BA5PLL1 514 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 CDK3Q00526 305 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 KIAA0930Q6ICG6 404 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-201ENST00000302528 ZC3H14Q6PJT7 736 aaKnown RBP10.04□□□□□ -0.8
CLIP1-201ENST00000302528 GDPD4Q6W3E5 623 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 IRF2BP2Q7Z5L9 587 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 FTMTQ8N4E7 242 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 SMPDL3AQ92484 453 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 FBXL8Q96CD0 374 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 RADILQ96JH8 1075 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 INPP4AQ96PE3 977 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-201ENST00000302528 SLC32A1Q9H598 525 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 RIMS1Q86UR5 1692 aaKnown RBP10.04□□□□□ -0.8
CLIP1-201ENST00000302528 MEGF6O75095 1541 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 KLRG2A4D1S0 409 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-201ENST00000302528 A6NCN8 305 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 RAB8AP61006 207 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 TTLL10Q6ZVT0 673 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 PACRGLQ8N7B6 248 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 TMEM234Q8WY98 164 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 SCRN2Q96FV2 425 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 MSLNLQ96KJ4 702 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 POTEKPQ9BYX7 375 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 GHRLQ9UBU3 117 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 IL20RAQ9UHF4 553 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 ARGFXA6NJG6 315 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 ERCC1P07992 297 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-201ENST00000302528 MMP3P08254 477 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 IMPDH1P20839 514 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 EDNRBP24530 442 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 GALK2Q01415 458 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 CARD17Q5XLA6 110 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 PPP2R2DQ66LE6 453 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 TRIM46Q7Z4K8 759 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 ZNF100Q8IYN0 542 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 MARVELD2Q8N4S9 558 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 OR4E2Q8NGC2 313 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 GNPDA2Q8TDQ7 276 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 NKD2Q969F2 451 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-201ENST00000302528 DNAJC19Q96DA6 116 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 FAM84AQ96KN4 292 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 PAPOLGQ9BWT3 736 aaKnown RBP10.04□□□□□ -0.8
CLIP1-201ENST00000302528 SUV39H2Q9H5I1 410 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 EBF2Q9HAK2 575 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 WDR37Q9Y2I8 494 aa10.04□□□□□ -0.8
CLIP1-201ENST00000302528 SPATA31A5Q5VU36 1347 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 SPATA31A7Q8IWB4 1347 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 TP53I11O14683 189 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 SLITRK5O94991 958 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 ELNP15502 786 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 PTNP21246 168 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 DPP6P42658 865 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 CDKN2CP42773 168 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 LSSP48449 732 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 POU3F4P49335 361 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 HTD2P86397 168 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 RFTN1Q14699 578 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-201ENST00000302528 UGCGQ16739 394 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 TBRG1Q3YBR2 411 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 FKBP1CQ5VVH2 108 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 FAM205BPQ63HN1 556 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 ERN2Q76MJ5 926 aaKnown RBP10.03□□□□□ -0.8
CLIP1-201ENST00000302528 BEST3Q8N1M1 668 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 ZNF808Q8N4W9 903 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-201ENST00000302528 OR51G2Q8NGK0 314 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 HAS1Q92839 578 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 PCED1BQ96HM7 432 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 ARL6Q9H0F7 186 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 SAV1Q9H4B6 383 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-201ENST00000302528 FOXO6A8MYZ6 492 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 AIPO00170 330 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 EEF1E1O43324 174 aaKnown RBP10.03□□□□□ -0.8
CLIP1-201ENST00000302528 SLC34A2O95436 690 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 FPR1P21462 350 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 BDKRB1P46663 353 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 FGL1Q08830 312 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 AKR1C8PQ5T2L2 129 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 SLC2A7Q6PXP3 512 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 RPLP0P6Q8NHW5 317 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 CANT1Q8WVQ1 401 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 MR1Q95460 341 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 ASB9Q96DX5 294 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 HSH2DQ96JZ2 352 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 MROQ9BYG7 248 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 WDR45Q9Y484 360 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms