RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 PAQR7Q86WK9 346 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 TMEM17Q86X19 198 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 RFT1Q96AA3 541 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 SLC35A5Q9BS91 424 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 NUDT15Q9NV35 164 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 SPATA6Q9NWH7 488 aaPredicted RBP11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 P2RX2Q9UBL9 471 aa11.42□□□□□ -0.58
SYNGAP1-201ENST00000293748 A0A075B6Q4 140 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 FAM170BA6NMN3 283 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 HHLA1C9JL84 531 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 ANHXE9PGG2 379 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 DFNA5O60443 496 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 NIPSNAP2O75323 286 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 RASAL1O95294 804 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 RAB36O95755 333 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 HK1P19367 917 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 F8A1P23610 371 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZNF77Q15935 545 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZNF630Q2M218 657 aaPredicted RBP11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 OGFRL1Q5TC84 451 aaPredicted RBP11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 OR4F3Q6IEY1 312 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZC3H14Q6PJT7 736 aaKnown RBP11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 ARL9Q6T311 187 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 MBOAT1Q6ZNC8 495 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 SCD5Q86SK9 330 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 LSM14AQ8ND56 463 aaKnown RBP11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 OR13C4Q8NGS5 318 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 THAP6Q8TBB0 222 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 TMEM74Q96NL1 305 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 AIFM2Q9BRQ8 373 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 WACQ9BTA9 647 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 ITM2CQ9NQX7 267 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 ADAMTS6Q9UKP5 1117 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZNF487B1APH4 448 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 M0R233 179 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 NPC1O15118 1278 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 STC2O76061 302 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 HLA-DQB2P05538 268 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 GRIA2P42262 883 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 C1orf189Q5VU69 101 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZNF676Q8N7Q3 588 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 KIAA1191Q96A73 305 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 TMEM80Q96HE8 168 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 SCGB3A2Q96PL1 93 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 FAIMQ9NVQ4 179 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 GBF1Q92538 1859 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 BOLA2-SMG1P6H3BVE0 249 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 CLDN4O14493 209 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 CLIC3O95833 236 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 PAFAH1B3Q15102 231 aaKnown RBP11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 BTBD16Q32M84 506 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZNF782Q6ZMW2 699 aaPredicted RBP11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 ASRGL1Q7L266 308 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 FAM46DQ8NEK8 389 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 OR2L3Q8NG85 312 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 SNIP1Q8TAD8 396 aaKnown RBP11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 AKAP1Q92667 903 aaKnown RBP eCLIP11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 HSH2DQ96JZ2 352 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 CDK15Q96Q40 435 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 TMEM246Q9BRR3 403 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 NDC1Q9BTX1 674 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 XKR8Q9H6D3 395 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 TREM1Q9NP99 234 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 HEBP1Q9NRV9 189 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 NME7Q9Y5B8 376 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 TRIP11Q15643 1979 aa11.41□□□□□ -0.58
SYNGAP1-201ENST00000293748 GOLGA4Q13439 2230 aaKnown RBP11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 A6NHS1 94 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 E7ESA3 106 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 CDC40O60508 579 aaKnown RBP eCLIP11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 RNASEH2AO75792 299 aaKnown RBP11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 ACVR2AP27037 513 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 RPL6Q02878 288 aaKnown RBP11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 SYVN1Q86TM6 617 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 PM20D2Q8IYS1 436 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 SYNPOQ8N3V7 929 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 NAT16Q8N8M0 369 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZNF514Q96K75 400 aaPredicted RBP11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 PRICKLE1Q96MT3 831 aaPredicted RBP11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 DERL2Q9GZP9 239 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 ENAMQ9NRM1 1142 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 PAK1IP1Q9NWT1 392 aaPredicted RBP11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZNF69Q9UC07 566 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 ARL5AQ9Y689 179 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 COLEC10Q9Y6Z7 277 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 C19orf67A6NJJ6 358 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 RCBTB2O95199 551 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 AGR2O95994 175 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 TFPTP0C1Z6 253 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZNF823P16415 610 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 FAM189A2Q15884 450 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 RAB12Q6IQ22 244 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZNF367Q7RTV3 350 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 COX18Q8N8Q8 333 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 OR2L5Q8NG80 312 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 OR6K6Q8NGW6 343 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 CLEC4CQ8WTT0 213 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 BARD1Q99728 777 aaKnown RBP11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 ASPNQ9BXN1 380 aa11.4□□□□□ -0.58
SYNGAP1-201ENST00000293748 MKKSQ9NPJ1 570 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms