RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 FRMD1Q8N878 549 aa13.77□□□□□ -0.21
TMEM47-201ENST00000275954 PDPRQ8NCN5 879 aa13.77□□□□□ -0.21
TMEM47-201ENST00000275954 VMP1Q96GC9 406 aa13.77□□□□□ -0.21
TMEM47-201ENST00000275954 HHIPQ96QV1 700 aa13.77□□□□□ -0.21
TMEM47-201ENST00000275954 TBX5Q99593 518 aa13.77□□□□□ -0.21
TMEM47-201ENST00000275954 GPATCH1Q9BRR8 931 aaKnown RBP13.77□□□□□ -0.21
TMEM47-201ENST00000275954 TBC1D17Q9HA65 648 aa13.77□□□□□ -0.21
TMEM47-201ENST00000275954 MALT1Q9UDY8 824 aa13.77□□□□□ -0.21
TMEM47-201ENST00000275954 TLX2O43763 284 aaPredicted RBP13.77□□□□□ -0.21
TMEM47-201ENST00000275954 CACNG3O60359 315 aa13.77□□□□□ -0.21
TMEM47-201ENST00000275954 CD9P21926 228 aa13.77□□□□□ -0.21
TMEM47-201ENST00000275954 CRISP3P54108 245 aa13.77□□□□□ -0.21
TMEM47-201ENST00000275954 PCDH1Q08174 1060 aa13.77□□□□□ -0.21
TMEM47-201ENST00000275954 PYDC2Q56P42 97 aa13.77□□□□□ -0.21
TMEM47-201ENST00000275954 ZNF655Q8N720 491 aaPredicted RBP13.77□□□□□ -0.21
TMEM47-201ENST00000275954 YTHDF1Q9BYJ9 559 aaKnown RBP13.77□□□□□ -0.21
TMEM47-201ENST00000275954 SDC3O75056 442 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 INMTO95050 263 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 B3GALT4O96024 378 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 MPC1LP0DKB6 136 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 CSNK2A2P19784 350 aaPredicted RBP13.76□□□□□ -0.21
TMEM47-201ENST00000275954 XKP51811 444 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 ZNF671Q8TAW3 534 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 ZFAND2BQ8WV99 257 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 CAPSLQ8WWF8 208 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 FCRL4Q96PJ5 515 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 GPR174Q9BXC1 333 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 SERHL2Q9H4I8 314 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 SERHLQ9NQF3 203 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 ZNF624Q9P2J8 865 aaPredicted RBP13.76□□□□□ -0.21
TMEM47-201ENST00000275954 CA5BQ9Y2D0 317 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 M0R129 80 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 H1F0P07305 194 aaKnown RBP13.76□□□□□ -0.21
TMEM47-201ENST00000275954 ALAS2P22557 587 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 HLCSP50747 726 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 MINDY4Q4G0A6 757 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 TMEM236Q5W0B7 351 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 KIAA1161Q6NSJ0 714 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 LIPIQ6XZB0 460 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 CBARPQ8N350 705 aaPredicted RBP13.76□□□□□ -0.21
TMEM47-201ENST00000275954 OR2A12Q8NGT7 310 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 KCNK12Q9HB15 430 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 CRNNQ9UBG3 495 aaPredicted RBP13.76□□□□□ -0.21
TMEM47-201ENST00000275954 PCDHGA8Q9Y5G5 932 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 SCN4AP35499 1836 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 TCRBV21S2A2A0A5A6 115 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 ARHGEF15O94989 841 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 NUDT7P0C024 238 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 TIMP2P16035 220 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 LHCGRP22888 699 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 MYF6P23409 242 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 MRPL58Q14197 206 aaKnown RBP13.76□□□□□ -0.21
TMEM47-201ENST00000275954 RNASE12Q5GAN4 147 aaKnown RBP13.76□□□□□ -0.21
TMEM47-201ENST00000275954 GALNT7Q86SF2 657 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 GPR151Q8TDV0 419 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 CIDECQ96AQ7 238 aaPredicted RBP13.76□□□□□ -0.21
TMEM47-201ENST00000275954 TRMT2BQ96GJ1 504 aaKnown RBP13.76□□□□□ -0.21
TMEM47-201ENST00000275954 PCBD2Q9H0N5 130 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 CD207Q9UJ71 328 aa13.76□□□□□ -0.21
TMEM47-201ENST00000275954 H0YAE9 185 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 MID1O15344 667 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 SRP54P61011 504 aaKnown RBP13.75□□□□□ -0.21
TMEM47-201ENST00000275954 HYAL2Q12891 473 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 PARS2Q7L3T8 475 aaKnown RBP13.75□□□□□ -0.21
TMEM47-201ENST00000275954 TCEANCQ8N8B7 351 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 C7orf57Q8NEG2 295 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 ASB11Q8WXH4 323 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 PKMYT1Q99640 499 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 ABCG4Q9H172 646 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 CDH7Q9ULB5 785 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 SNPHO15079 494 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 OR12D1P0DN82 309 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 AOAHP28039 575 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 CCSMST1Q4G0I0 132 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 AFMIDQ63HM1 303 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 FAM131AQ6UXB0 335 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 ZNF554Q86TJ5 538 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 ZNF761Q86XN6 746 aaPredicted RBP13.75□□□□□ -0.21
TMEM47-201ENST00000275954 FAM86B1Q8N7N1 296 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 OTUB2Q96DC9 234 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 ZNF583Q96ND8 569 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 TRIB3Q96RU7 358 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 FAM129BQ96TA1 746 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 PCDHGB5Q9Y5G0 923 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 SPAG17Q6Q759 2223 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 SIPA1L1O43166 1804 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 PRR23D1E9PI22 279 aaPredicted RBP13.75□□□□□ -0.21
TMEM47-201ENST00000275954 C1SP09871 688 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 PRR23D2P0DMB1 279 aaPredicted RBP13.75□□□□□ -0.21
TMEM47-201ENST00000275954 TYRP1P17643 537 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 CR2P20023 1033 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 MPIP34949 423 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 LARS2Q15031 903 aaKnown RBP13.75□□□□□ -0.21
TMEM47-201ENST00000275954 REEP3Q6NUK4 255 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 RASGEF1AQ8N9B8 481 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 UXS1Q8NBZ7 420 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 ZNF740Q8NDX6 193 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 PHOSPHO2Q8TCD6 241 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 HDAC2Q92769 488 aaKnown RBP13.75□□□□□ -0.21
TMEM47-201ENST00000275954 CEP295NLQ96MC4 621 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms