RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 RASAL1O95294 804 aa15.06■□□□□ 0
USE1-201ENST00000263897 TYK2P29597 1187 aa15.06■□□□□ 0
USE1-201ENST00000263897 CD96P40200 585 aa15.06■□□□□ 0
USE1-201ENST00000263897 HSD17B7P56937 341 aa15.06■□□□□ 0
USE1-201ENST00000263897 RAB38P57729 211 aa15.06■□□□□ 0
USE1-201ENST00000263897 TAS2R50P59544 299 aa15.06■□□□□ 0
USE1-201ENST00000263897 IRF9Q00978 393 aa15.06■□□□□ 0
USE1-201ENST00000263897 TUBA3CQ13748 450 aa15.06■□□□□ 0
USE1-201ENST00000263897 ACAP2Q15057 778 aa15.06■□□□□ 0
USE1-201ENST00000263897 UAP1Q16222 522 aaPredicted RBP15.06■□□□□ 0
USE1-201ENST00000263897 GLE1Q53GS7 698 aaKnown RBP15.06■□□□□ 0
USE1-201ENST00000263897 UBAP2Q5T6F2 1119 aaKnown RBP15.06■□□□□ 0
USE1-201ENST00000263897 TUBA3EQ6PEY2 450 aa15.06■□□□□ 0
USE1-201ENST00000263897 RPS19BP1Q86WX3 136 aaKnown RBP15.06■□□□□ 0
USE1-201ENST00000263897 LGI4Q8N135 537 aa15.06■□□□□ 0
USE1-201ENST00000263897 NFAM1Q8NET5 270 aaPredicted RBP15.06■□□□□ 0
USE1-201ENST00000263897 DNAJB8Q8NHS0 232 aa15.06■□□□□ 0
USE1-201ENST00000263897 IFT81Q8WYA0 676 aa15.06■□□□□ 0
USE1-201ENST00000263897 NR4A3Q92570 626 aa15.06■□□□□ 0
USE1-201ENST00000263897 UBE2E3Q969T4 207 aa15.06■□□□□ 0
USE1-201ENST00000263897 SERINC2Q96SA4 455 aa15.06■□□□□ 0
USE1-201ENST00000263897 UTP23Q9BRU9 249 aaKnown RBP15.06■□□□□ 0
USE1-201ENST00000263897 CDCP1Q9H5V8 836 aa15.06■□□□□ 0
USE1-201ENST00000263897 PRDM7Q9NQW5 492 aa15.06■□□□□ 0
USE1-201ENST00000263897 OPTCQ9UBM4 332 aa15.06■□□□□ 0
USE1-201ENST00000263897 PCDHGB6Q9Y5F9 930 aa15.06■□□□□ 0
USE1-201ENST00000263897 A0A096LPK6 155 aa15.05■□□□□ -0
USE1-201ENST00000263897 SAGE2PA6NJ88 616 aa15.05■□□□□ -0
USE1-201ENST00000263897 A8MUA0 341 aa15.05■□□□□ -0
USE1-201ENST00000263897 CDK2AP1O14519 115 aa15.05■□□□□ -0
USE1-201ENST00000263897 LDLRP01130 860 aa15.05■□□□□ -0
USE1-201ENST00000263897 ALDOAP04075 364 aaKnown RBP15.05■□□□□ -0
USE1-201ENST00000263897 CTAGE8P0CG41 777 aa15.05■□□□□ -0
USE1-201ENST00000263897 EPB42P16452 691 aa15.05■□□□□ -0
USE1-201ENST00000263897 MSH2P43246 934 aa15.05■□□□□ -0
USE1-201ENST00000263897 MTTPP55157 894 aa15.05■□□□□ -0
USE1-201ENST00000263897 TGM3Q08188 693 aa15.05■□□□□ -0
USE1-201ENST00000263897 ZNF766Q5HY98 468 aa15.05■□□□□ -0
USE1-201ENST00000263897 SCUBE1Q8IWY4 988 aa15.05■□□□□ -0
USE1-201ENST00000263897 CTAGE4Q8IX94 777 aa15.05■□□□□ -0
USE1-201ENST00000263897 LAS2Q8IYD9 372 aa15.05■□□□□ -0
USE1-201ENST00000263897 KIF2BQ8N4N8 673 aa15.05■□□□□ -0
USE1-201ENST00000263897 MDS2Q8NDY4 140 aa15.05■□□□□ -0
USE1-201ENST00000263897 SRFBP1Q8NEF9 429 aaKnown RBP15.05■□□□□ -0
USE1-201ENST00000263897 ZNF473Q8WTR7 871 aaKnown RBP15.05■□□□□ -0
USE1-201ENST00000263897 C5orf34Q96MH7 638 aa15.05■□□□□ -0
USE1-201ENST00000263897 GPR78Q96P69 363 aa15.05■□□□□ -0
USE1-201ENST00000263897 SIGLEC12Q96PQ1 595 aa15.05■□□□□ -0
USE1-201ENST00000263897 CDC42EP4Q9H3Q1 356 aaKnown RBP15.05■□□□□ -0
USE1-201ENST00000263897 PRTFDC1Q9NRG1 225 aa15.05■□□□□ -0
USE1-201ENST00000263897 PLEKHB1Q9UF11 243 aaPredicted RBP15.05■□□□□ -0
USE1-201ENST00000263897 DAPP1Q9UN19 280 aa15.05■□□□□ -0
USE1-201ENST00000263897 OSGIN2Q9Y236 505 aa15.05■□□□□ -0
USE1-201ENST00000263897 CLDN16Q9Y5I7 305 aa15.05■□□□□ -0
USE1-201ENST00000263897 MYO7BQ6PIF6 2116 aa15.04■□□□□ -0
USE1-201ENST00000263897 GABRR3A8MPY1 467 aa15.04■□□□□ -0
USE1-201ENST00000263897 CYR61O00622 381 aa15.04■□□□□ -0
USE1-201ENST00000263897 KLK8O60259 260 aa15.04■□□□□ -0
USE1-201ENST00000263897 CRYABP02511 175 aaKnown RBP15.04■□□□□ -0
USE1-201ENST00000263897 ST13P50502 369 aaKnown RBP15.04■□□□□ -0
USE1-201ENST00000263897 TDGF1P3P51864 188 aa15.04■□□□□ -0
USE1-201ENST00000263897 HNRNPFP52597 415 aaKnown RBP15.04■□□□□ -0
USE1-201ENST00000263897 LIM2P55344 173 aa15.04■□□□□ -0
USE1-201ENST00000263897 PFKFB4Q16877 469 aa15.04■□□□□ -0
USE1-201ENST00000263897 SPINK14Q6IE38 97 aa15.04■□□□□ -0
USE1-201ENST00000263897 MED27Q6P2C8 311 aa15.04■□□□□ -0
USE1-201ENST00000263897 UBE3DQ7Z6J8 389 aa15.04■□□□□ -0
USE1-201ENST00000263897 ZNF595Q8IYB9 648 aa15.04■□□□□ -0
USE1-201ENST00000263897 TEX9Q8N6V9 391 aa15.04■□□□□ -0
USE1-201ENST00000263897 TMEM52Q8NDY8 209 aa15.04■□□□□ -0
USE1-201ENST00000263897 OR7G3Q8NG95 312 aa15.04■□□□□ -0
USE1-201ENST00000263897 ADAMTS18Q8TE60 1221 aa15.04■□□□□ -0
USE1-201ENST00000263897 SLC44A1Q8WWI5 657 aa15.04■□□□□ -0
USE1-201ENST00000263897 KCNC2Q96PR1 638 aa15.04■□□□□ -0
USE1-201ENST00000263897 FMO2Q99518 471 aa15.04■□□□□ -0
USE1-201ENST00000263897 TBCDQ9BTW9 1192 aa15.04■□□□□ -0
USE1-201ENST00000263897 MS4A8Q9BY19 250 aa15.04■□□□□ -0
USE1-201ENST00000263897 ROGDIQ9GZN7 287 aa15.04■□□□□ -0
USE1-201ENST00000263897 ANKRD10Q9NXR5 420 aa15.04■□□□□ -0
USE1-201ENST00000263897 KCMF1Q9P0J7 381 aa15.04■□□□□ -0
USE1-201ENST00000263897 MRPS33Q9Y291 106 aaKnown RBP15.04■□□□□ -0
USE1-201ENST00000263897 TGFBR3LH3BV60 316 aa15.03■□□□□ -0
USE1-201ENST00000263897 KIF2AO00139 706 aaPredicted RBP15.03■□□□□ -0
USE1-201ENST00000263897 CTNSO60931 367 aa15.03■□□□□ -0
USE1-201ENST00000263897 ACSL3O95573 720 aa15.03■□□□□ -0
USE1-201ENST00000263897 TGFB1P01137 390 aa15.03■□□□□ -0
USE1-201ENST00000263897 CERS1P27544 350 aa15.03■□□□□ -0
USE1-201ENST00000263897 ECHS1P30084 290 aa15.03■□□□□ -0
USE1-201ENST00000263897 SERPINB1P30740 379 aa15.03■□□□□ -0
USE1-201ENST00000263897 SERPINB8P50452 374 aa15.03■□□□□ -0
USE1-201ENST00000263897 ALDH18A1P54886 795 aaKnown RBP15.03■□□□□ -0
USE1-201ENST00000263897 MLF1P58340 268 aa15.03■□□□□ -0
USE1-201ENST00000263897 SLC13A2Q13183 592 aa15.03■□□□□ -0
USE1-201ENST00000263897 RCN2Q14257 317 aa15.03■□□□□ -0
USE1-201ENST00000263897 NAA30Q147X3 362 aaPredicted RBP15.03■□□□□ -0
USE1-201ENST00000263897 SETDB1Q15047 1291 aa15.03■□□□□ -0
USE1-201ENST00000263897 TERF2Q15554 542 aa15.03■□□□□ -0
USE1-201ENST00000263897 OR1C1Q15619 314 aa15.03■□□□□ -0
USE1-201ENST00000263897 C4orf17Q53FE4 359 aa15.03■□□□□ -0
USE1-201ENST00000263897 TMEM35AQ53FP2 167 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms