RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 PMS2P1A4D2B8 440 aa26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 EEDO75530 441 aaKnown RBP26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 CD1EP15812 388 aa26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 SERPINB1P30740 379 aa26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 RAP1GDS1P52306 607 aa26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 ZNF33BQ06732 778 aa26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 RGS1Q08116 209 aa26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 ILKQ13418 452 aa26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 CHSY3Q70JA7 882 aa26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 ZFAND4Q86XD8 727 aa26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 MARCH9Q86YJ5 346 aa26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 CAMKVQ8NCB2 501 aa26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 NUDT8Q8WV74 236 aa26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 CHTF18Q8WVB6 975 aa26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 SLC7A6OSQ96CW6 309 aaPredicted RBP26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 PPP3R2Q96LZ3 170 aa26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 TEFMQ96QE5 360 aaKnown RBP26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 OR6C1Q96RD1 312 aa26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 APMAPQ9HDC9 416 aa26.12■■□□□ 1.77
SMARCD3-201ENST00000262188 CNOT1A5YKK6 2376 aaKnown RBP26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 CCL4P13236 92 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 E2F1Q01094 437 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 PWP1Q13610 501 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 BCL2A1Q16548 175 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 ADPRMQ3LIE5 342 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 C10orf62Q5T681 223 aaPredicted RBP26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 IL23RQ5VWK5 629 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 ZNF793Q6ZN11 406 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 MTDHQ86UE4 582 aaKnown RBP26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 ZNF655Q8N720 491 aaPredicted RBP26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 CLHC1Q8NHS4 586 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 LRRC37BQ96QE4 947 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 NMUR2Q9GZQ4 415 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 CHRNA10Q9GZZ6 450 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 KLK1P06870 262 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 TACR1P25103 407 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 ACSM2AQ08AH3 577 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 UBAP2LQ14157 1087 aaKnown RBP26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 TMTC4Q5T4D3 741 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 HES3Q5TGS1 186 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 ACSM2BQ68CK6 577 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 B3GNT6Q6ZMB0 384 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 UTP15Q8TED0 518 aaKnown RBP26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 ZNF501Q96CX3 271 aaPredicted RBP26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 CTRCQ99895 268 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 MYLK2Q9H1R3 596 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 PCDHGA1Q9Y5H4 931 aa26.11■■□□□ 1.77
SMARCD3-201ENST00000262188 EFCAB7A8K855 629 aa26.1■■□□□ 1.77
SMARCD3-201ENST00000262188 H3BMH7 237 aa26.1■■□□□ 1.77
SMARCD3-201ENST00000262188 DNAJB6O75190 326 aa26.1■■□□□ 1.77
SMARCD3-201ENST00000262188 VPS4BO75351 444 aa26.1■■□□□ 1.77
SMARCD3-201ENST00000262188 IL1RNP18510 177 aa26.1■■□□□ 1.77
SMARCD3-201ENST00000262188 BSGP35613 385 aa26.1■■□□□ 1.77
SMARCD3-201ENST00000262188 NOVA1P51513 510 aaKnown RBP26.1■■□□□ 1.77
SMARCD3-201ENST00000262188 PRTGQ2VWP7 1150 aa26.1■■□□□ 1.77
SMARCD3-201ENST00000262188 THOC7Q6I9Y2 204 aaKnown RBP26.1■■□□□ 1.77
SMARCD3-201ENST00000262188 METTL4Q8N3J2 472 aa26.1■■□□□ 1.77
SMARCD3-201ENST00000262188 LSM14AQ8ND56 463 aaKnown RBP26.1■■□□□ 1.77
SMARCD3-201ENST00000262188 OR8K5Q8NH50 307 aa26.1■■□□□ 1.77
SMARCD3-201ENST00000262188 SIDT1Q9NXL6 827 aaKnown RBP26.1■■□□□ 1.77
SMARCD3-201ENST00000262188 ARMCX1Q9P291 453 aa26.1■■□□□ 1.77
SMARCD3-201ENST00000262188 PPT2Q9UMR5 302 aa26.1■■□□□ 1.77
SMARCD3-201ENST00000262188 ARHGAP10A1A4S6 786 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 ZNF860A6NHJ4 632 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 UBDO15205 165 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 SRPX2O60687 465 aaPredicted RBP26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 OR2B3O76000 313 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 KLHL18O94889 574 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 PRPH2P23942 346 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 GSTM2P28161 218 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 CSTF2P33240 577 aaKnown RBP eCLIP26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 ERVK-8P63133 956 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 DEFB134Q4QY38 66 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 CDCP2Q5VXM1 449 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 ABHD17CQ6PCB6 329 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 METTL27Q8N6F8 245 aaPredicted RBP26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 OR2L5Q8NG80 312 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 C11orf24Q96F05 449 aaPredicted RBP26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 MPP4Q96JB8 637 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 C10orf90Q96M02 699 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 ZNF285Q96NJ3 590 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 C9JVG2 144 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 H0Y3Z8 333 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 CSO75390 466 aaKnown RBP26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 MT-CO3P00414 261 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 G6PDP11413 515 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 STXBP1P61764 594 aaKnown RBP26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 RCN1Q15293 331 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 TMEM214Q6NUQ4 689 aaKnown RBP26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 NOXRED1Q6NXP6 359 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 ARHGEF39Q8N4T4 335 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 CDC26Q8NHZ8 85 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 PMEPA1Q969W9 287 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 RGMAQ96B86 450 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 EGLN2Q96KS0 407 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 CGREF1Q99674 301 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 PRDM7Q9NQW5 492 aa26.09■■□□□ 1.77
SMARCD3-201ENST00000262188 ENTPD5O75356 428 aa26.08■■□□□ 1.77
SMARCD3-201ENST00000262188 TIAF1O95411 115 aa26.08■■□□□ 1.77
SMARCD3-201ENST00000262188 CSRP1P21291 193 aaKnown RBP26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms