RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 RBP7Q96R05 134 aa13.38□□□□□ -0.27
CDH1-201ENST00000261769 SYT11Q9BT88 431 aa13.38□□□□□ -0.27
CDH1-201ENST00000261769 KCNK13Q9HB14 408 aa13.38□□□□□ -0.27
CDH1-201ENST00000261769 KCNK12Q9HB15 430 aa13.38□□□□□ -0.27
CDH1-201ENST00000261769 VIRMAQ69YN4 1812 aaKnown RBP13.38□□□□□ -0.27
CDH1-201ENST00000261769 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.37□□□□□ -0.27
CDH1-201ENST00000261769 OR52A4PA6NMU1 304 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 P04436 131 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 GABRA3P34903 492 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 FADDQ13158 208 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 MYBPC3Q14896 1274 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 TAB1Q15750 504 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 KLHL22Q53GT1 634 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 PIGWQ7Z7B1 504 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 CEP97Q8IW35 865 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 CBR4Q8N4T8 237 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 RASGEF1AQ8N9B8 481 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 OR10G2Q8NGC3 310 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 HUS1BQ8NHY5 278 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 CRB3Q9BUF7 120 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 HDAC8Q9BY41 377 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 PPP4R1LQ9P1A2 415 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 MYO7AQ13402 2215 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 FAM149AA5PLN7 773 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 TOR1BO14657 336 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 KLKB1P03952 638 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 HNRNPCP07910 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDH1-201ENST00000261769 LYNP07948 512 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 MNDAP41218 407 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 LACTB2Q53H82 288 aaPredicted RBP13.37□□□□□ -0.27
CDH1-201ENST00000261769 UNC50Q53HI1 259 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 TRIM61Q5EBN2 209 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 AGBL5Q8NDL9 886 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 PITHD1Q9GZP4 211 aaPredicted RBP13.37□□□□□ -0.27
CDH1-201ENST00000261769 TTYH1Q9H313 450 aaPredicted RBP13.37□□□□□ -0.27
CDH1-201ENST00000261769 TVP23BQ9NYZ1 205 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 IRAK3Q9Y616 596 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 ZCWPW2A0A1B0GU75 182 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 CPSF4LA6NMK7 179 aaKnown RBP13.37□□□□□ -0.27
CDH1-201ENST00000261769 HCRTR2O43614 444 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 ANGPTL1O95841 491 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 PBX2P40425 430 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 PRPF38BQ5VTL8 546 aaKnown RBP13.37□□□□□ -0.27
CDH1-201ENST00000261769 SYVN1Q86TM6 617 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 NUP43Q8NFH3 380 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 ARRDC2Q8TBH0 407 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 PEX11GQ96HA9 241 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 POMPQ9Y244 141 aa13.37□□□□□ -0.27
CDH1-201ENST00000261769 FEZF1A0PJY2 475 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 TAF4O00268 1085 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 UGDHO60701 494 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 CPNE3O75131 537 aaKnown RBP13.36□□□□□ -0.27
CDH1-201ENST00000261769 ZNF3P17036 446 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 CSNK1EP49674 416 aaKnown RBP13.36□□□□□ -0.27
CDH1-201ENST00000261769 SLC5A9Q2M3M2 681 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 C1orf53Q5VUE5 145 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 LCTLQ6UWM7 567 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 RNF130Q86XS8 419 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 FAR1Q8WVX9 515 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 SH3YL1Q96HL8 342 aaPredicted RBP13.36□□□□□ -0.27
CDH1-201ENST00000261769 TRIM2Q9C040 744 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 HMG20AQ9NP66 347 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 MAN2B2Q9Y2E5 1009 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 PCDHGB5Q9Y5G0 923 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 OPN1SWP03999 348 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 GNALP38405 381 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 RACK1P63244 317 aaKnown RBP13.36□□□□□ -0.27
CDH1-201ENST00000261769 RBBP4Q09028 425 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 MRPL58Q14197 206 aaKnown RBP13.36□□□□□ -0.27
CDH1-201ENST00000261769 CTC1Q2NKJ3 1217 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 EID2Q8N6I1 236 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 ARFGAP1Q8N6T3 406 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 TM9SF4Q92544 642 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 CFHR5Q9BXR6 569 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 CSTAP01040 98 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 PSMA1P25786 263 aaKnown RBP13.36□□□□□ -0.27
CDH1-201ENST00000261769 EMP2P54851 167 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 SELENOVP59797 346 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 GANABQ14697 944 aaKnown RBP13.36□□□□□ -0.27
CDH1-201ENST00000261769 RPS27LQ71UM5 84 aaKnown RBP13.36□□□□□ -0.27
CDH1-201ENST00000261769 LGI4Q8N135 537 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 FAM156AQ8NDB6 213 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 OR8K5Q8NH50 307 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 SEC14L1Q92503 715 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 ZBTB26Q9HCK0 441 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 SHOX2O60902 331 aaPredicted RBP13.36□□□□□ -0.27
CDH1-201ENST00000261769 ARHGEF15O94989 841 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 IGHEP01854 428 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 MTHFD1P11586 935 aaKnown RBP13.36□□□□□ -0.27
CDH1-201ENST00000261769 AK4P27144 223 aaPredicted RBP13.36□□□□□ -0.27
CDH1-201ENST00000261769 DNAJA1P31689 397 aaKnown RBP13.36□□□□□ -0.27
CDH1-201ENST00000261769 ZNF140P52738 457 aaPredicted RBP13.36□□□□□ -0.27
CDH1-201ENST00000261769 GRIK2Q13002 908 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 ZNF77Q15935 545 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 MDGA1Q8NFP4 955 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 WDR60Q8WVS4 1066 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 RELTQ969Z4 430 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 TAS2R1Q9NYW7 299 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 MMP17Q9ULZ9 603 aa13.36□□□□□ -0.27
CDH1-201ENST00000261769 FARS2O95363 451 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms