RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 H3F3CQ6NXT2 135 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 PAPD4Q6PIY7 484 aaKnown RBP16.65■□□□□ 0.26
PTPN11-207ENST00000639857 IFT20Q8IY31 132 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 FAM26EQ8N5C1 309 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 SIRT6Q8N6T7 355 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 SRFBP1Q8NEF9 429 aaKnown RBP16.65■□□□□ 0.26
PTPN11-207ENST00000639857 CCT6BQ92526 530 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 MRRFQ96E11 262 aaKnown RBP16.65■□□□□ 0.26
PTPN11-207ENST00000639857 PAFAH2Q99487 392 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 RBCK1Q9BYM8 510 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 REXO4Q9GZR2 422 aaKnown RBP16.65■□□□□ 0.26
PTPN11-207ENST00000639857 PRDM9Q9NQV7 894 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 AGPAT4Q9NRZ5 378 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 ADGRE2Q9UHX3 823 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 TMCO1Q9UM00 188 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 CSAG2Q9Y5P2 127 aa16.65■□□□□ 0.26
PTPN11-207ENST00000639857 COPG1Q9Y678 874 aaKnown RBP16.65■□□□□ 0.26
PTPN11-207ENST00000639857 IGKV3D-11A0A0A0MRZ8 115 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 TRAV17A0A0B4J275 112 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 C4orf51C9J302 202 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 PRMT3O60678 531 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 UGDHO60701 494 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 B3GALT4O96024 378 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 CELA2AP08217 269 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 MYBL2P10244 700 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 COL6A2P12110 1019 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 EPB42P16452 691 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 CD22P20273 847 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 GLRBP48167 497 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 PIK3CGP48736 1102 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 TNFSF10P50591 281 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 BTN3A2P78410 334 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 IRF9Q00978 393 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 ACTN3Q08043 901 aaPredicted RBP16.64■□□□□ 0.25
PTPN11-207ENST00000639857 RCN2Q14257 317 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 FBXO48Q5FWF7 155 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 ABHD17BQ5VST6 288 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 VN1R5Q7Z5H4 357 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 LAS2Q8IYD9 372 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 SHISA5Q8N114 240 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 LGI4Q8N135 537 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 CA13Q8N1Q1 262 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 CISD2Q8N5K1 135 aaKnown RBP16.64■□□□□ 0.25
PTPN11-207ENST00000639857 ARMC2Q8NEN0 867 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 CNDP1Q96KN2 507 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 GPR78Q96P69 363 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 SERINC2Q96SA4 455 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 ROGDIQ9GZN7 287 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 ASF1BQ9NVP2 202 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 MAP10Q9P2G4 905 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 ZNF490Q9ULM2 529 aaPredicted RBP16.64■□□□□ 0.25
PTPN11-207ENST00000639857 TSC22D4Q9Y3Q8 395 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 ASB1Q9Y576 335 aa16.64■□□□□ 0.25
PTPN11-207ENST00000639857 TNPO3Q9Y5L0 923 aaKnown RBP16.64■□□□□ 0.25
PTPN11-207ENST00000639857 DOPEY2Q9Y3R5 2298 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 FLNBO75369 2602 aaKnown RBP16.63■□□□□ 0.25
PTPN11-207ENST00000639857 IGHV3-20A0A0C4DH32 117 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 TCRBV16S1A1N1A0A5B0 115 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 TCP11X1B4DZS4 312 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 B3GALT2O43825 422 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 B4GALT2O60909 372 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 TBX6O95947 436 aaPredicted RBP16.63■□□□□ 0.25
PTPN11-207ENST00000639857 GFAPP14136 432 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 GNLYP22749 145 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 MSH2P43246 934 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 MTTPP55157 894 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 OR4D2P58180 307 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 PCBP2Q15366 365 aaKnown RBP eCLIP16.63■□□□□ 0.25
PTPN11-207ENST00000639857 TERF2Q15554 542 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 TSNAXIP1Q2TAA8 658 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 TMEM35AQ53FP2 167 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 UBAP2Q5T6F2 1119 aaKnown RBP16.63■□□□□ 0.25
PTPN11-207ENST00000639857 GRHL2Q6ISB3 625 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 MED27Q6P2C8 311 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 ABHD17CQ6PCB6 329 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 TRMT10CQ7L0Y3 403 aaKnown RBP16.63■□□□□ 0.25
PTPN11-207ENST00000639857 TSLPQ969D9 159 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 ZNF354BQ96LW1 612 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 PTCHD1Q96NR3 888 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 QRFPRQ96P65 431 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 KCNC2Q96PR1 638 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 MRPS33Q9Y291 106 aaKnown RBP16.63■□□□□ 0.25
PTPN11-207ENST00000639857 PTPN13Q12923 2485 aa16.63■□□□□ 0.25
PTPN11-207ENST00000639857 OR5H15A6NDH6 313 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 OR2W5A6NFC9 320 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 CLDN4O14493 209 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 DNAJB6O75190 326 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 RBP1P09455 135 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 UQCRFS1P47985 274 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 ARFIP1P53367 373 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 HSD17B7P56937 341 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 RAB38P57729 211 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 SLC26A5P58743 744 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 TAS2R50P59544 299 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 TECRLQ5HYJ1 363 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 LIPJQ5W064 366 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 SCUBE1Q8IWY4 988 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 SLC5A8Q8N695 610 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 ZNF473Q8WTR7 871 aaKnown RBP16.62■□□□□ 0.25
PTPN11-207ENST00000639857 MS4A8Q9BY19 250 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms