RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 KIAA1614Q5VZ46 1190 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 WASH2PQ6VEQ5 465 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 AMIGO1Q86WK6 493 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 NUDT13Q86X67 352 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 EID3Q8N140 333 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 FRMD1Q8N878 549 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 FAM47BQ8NA70 645 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 OR13H1Q8NG92 308 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 CYGBQ8WWM9 190 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 MSANTD3Q96H12 275 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 TRIM4Q9C037 500 aa16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 POLMQ9NP87 494 aaPredicted RBP16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 SAMD4AQ9UPU9 718 aaKnown RBP16.54■□□□□ 0.24
PCDHGC3-205ENST00000617641 TNFAIP8O95379 198 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 CHRM5P08912 532 aaPredicted RBP16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 GRK3P35626 688 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 CRATP43155 626 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 YPEL5P62699 121 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 ABATP80404 500 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 SPIDRQ14159 915 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 STK32CQ86UX6 486 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 NRROSQ86YC3 692 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 TOE1Q96GM8 510 aaKnown RBP16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 TEFMQ96QE5 360 aaKnown RBP16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 C17orf62Q9BQA9 187 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 KLHL31Q9H511 634 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 TMEM184CQ9NVA4 438 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 SMPD3Q9NY59 655 aaPredicted RBP16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 TAS2R9Q9NYW1 312 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 C5AR2Q9P296 337 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 A0A1B0GTW7 788 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 LRIT2A6NDA9 550 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 GNGT2O14610 69 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 KDM1AO60341 852 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 SNAP29O95721 258 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 ETFAP13804 333 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 SHMT2P34897 504 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 SOAT1P35610 550 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 SLC19A1P41440 591 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 PPP1R8Q12972 351 aaKnown RBP16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 KRT80Q6KB66 452 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 SLC22A18ASQ8N1D0 253 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 QRFPRQ96P65 431 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 GAS2L1Q99501 681 aaPredicted RBP16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 SPATA9Q9BWV2 254 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 SOX17Q9H6I2 414 aaPredicted RBP16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 ZNF696Q9H7X3 374 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 SYNPO2LQ9H987 977 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 SLC2A4RGQ9NR83 387 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 TEX10Q9NXF1 929 aaPredicted RBP16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 PCOLCE2Q9UKZ9 415 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 FAF1Q9UNN5 650 aaPredicted RBP16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 HS3ST3A1Q9Y663 406 aa16.53■□□□□ 0.24
PCDHGC3-205ENST00000617641 A6NCN8 305 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 C10orf142B7Z368 130 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 MAP3K13O43283 966 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 NDUFS1P28331 727 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 CMPK1P30085 196 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 ARSFP54793 590 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 TDGQ13569 410 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 VEZF1Q14119 521 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 LRIT3Q3SXY7 679 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 SLC36A3Q495N2 470 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 FOXB2Q5VYV0 432 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 OR4C11Q6IEV9 310 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 VTCN1Q7Z7D3 282 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 HS3ST5Q8IZT8 346 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 ZCCHC7Q8N3Z6 543 aaKnown RBP16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 TRIML2Q8N7C3 387 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 TTLQ8NG68 377 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 SLAMF7Q9NQ25 335 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 OR6C2Q9NZP2 312 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 DNAH14Q0VDD8 3507 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 FANCMQ8IYD8 2048 aa16.52■□□□□ 0.24
PCDHGC3-205ENST00000617641 LRP4O75096 1905 aa16.52■□□□□ 0.23
PCDHGC3-205ENST00000617641 C4orf51C9J302 202 aa16.52■□□□□ 0.23
PCDHGC3-205ENST00000617641 CLIC3O95833 236 aa16.52■□□□□ 0.23
PCDHGC3-205ENST00000617641 CHRNB1P11230 501 aa16.52■□□□□ 0.23
PCDHGC3-205ENST00000617641 AQP1P29972 269 aa16.52■□□□□ 0.23
PCDHGC3-205ENST00000617641 CHI3L1P36222 383 aaPredicted RBP16.52■□□□□ 0.23
PCDHGC3-205ENST00000617641 SSR2P43308 183 aa16.52■□□□□ 0.23
PCDHGC3-205ENST00000617641 DGKEP52429 567 aa16.52■□□□□ 0.23
PCDHGC3-205ENST00000617641 DAG1Q14118 895 aa16.52■□□□□ 0.23
PCDHGC3-205ENST00000617641 ZIC1Q15915 447 aa16.52■□□□□ 0.23
PCDHGC3-205ENST00000617641 ZNF793Q6ZN11 406 aa16.52■□□□□ 0.23
PCDHGC3-205ENST00000617641 ZDHHC13Q8IUH4 622 aa16.52■□□□□ 0.23
PCDHGC3-205ENST00000617641 ZDHHC21Q8IVQ6 265 aa16.52■□□□□ 0.23
PCDHGC3-205ENST00000617641 UCN3Q969E3 161 aa16.52■□□□□ 0.23
PCDHGC3-205ENST00000617641 POP5Q969H6 163 aaKnown RBP16.52■□□□□ 0.23
PCDHGC3-205ENST00000617641 FBXL20Q96IG2 436 aa16.52■□□□□ 0.23
PCDHGC3-205ENST00000617641 G3V2T6 193 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 PRAMEF26H0Y7S4 382 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 BTN3A3O00478 584 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 PGM3O95394 542 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 F3P13726 295 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 PCGF2P35227 344 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 HYAL2Q12891 473 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 HEPACAMQ14CZ8 416 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 SLC5A12Q1EHB4 618 aa16.51■□□□□ 0.23
PCDHGC3-205ENST00000617641 CYBRD1Q53TN4 286 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms