RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 RAD1O60671 282 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 CPNE3O75131 537 aaKnown RBP8.42□□□□□ -1.06
SMAD4-217ENST00000611848 SCRG1O75711 98 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 ATP6AP2O75787 350 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 OR2B3O76000 313 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 TIAF1O95411 115 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 S100BP04271 92 aaPredicted RBP8.42□□□□□ -1.06
SMAD4-217ENST00000611848 HBQ1P09105 142 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 UROSP10746 265 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 NPPBP16860 134 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 ZNF28P17035 718 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 LBPP18428 481 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 GGT5P36269 586 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 AGTR2P50052 363 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 PKNOX1P55347 436 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 STX1BP61266 288 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 YBX1P67809 324 aaKnown RBP8.42□□□□□ -1.06
SMAD4-217ENST00000611848 MS4A2Q01362 244 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 CLN3Q13286 438 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 PCBP2Q15366 365 aaKnown RBP eCLIP8.42□□□□□ -1.062e-6■■□□□ 13
SMAD4-217ENST00000611848 GSTA3Q16772 222 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 ZXDCQ2QGD7 858 aaPredicted RBP8.42□□□□□ -1.06
SMAD4-217ENST00000611848 DEFB110Q30KQ9 67 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 XKR7Q5GH72 579 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 TCTE1Q5JU00 501 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 FAM219BQ5XKK7 198 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 ZFP1Q6P2D0 407 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 PAOXQ6QHF9 649 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 C6orf15Q6UXA7 325 aaPredicted RBP8.42□□□□□ -1.06
SMAD4-217ENST00000611848 RNF44Q7L0R7 432 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 SPATA19Q7Z5L4 167 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 SYVN1Q86TM6 617 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 PAQR7Q86WK9 346 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 TMEM126BQ8IUX1 230 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 MCATQ8IVS2 390 aaKnown RBP8.42□□□□□ -1.06
SMAD4-217ENST00000611848 KLHDC8AQ8IYD2 350 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 ESX1Q8N693 406 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 PDPRQ8NCN5 879 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 PYCR2Q96C36 320 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 ROPN1LQ96C74 230 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 LRFN5Q96NI6 719 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 KCNA7Q96RP8 456 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 ZNF382Q96SR6 550 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 ZFYVE21Q9BQ24 234 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 ECSITQ9BQ95 431 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 VCX3BQ9H321 246 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 YY1AP1Q9H869 796 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 SEMA4BQ9NPR2 832 aaPredicted RBP8.42□□□□□ -1.06
SMAD4-217ENST00000611848 SDR39U1Q9NRG7 319 aaPredicted RBP8.42□□□□□ -1.06
SMAD4-217ENST00000611848 C6orf203Q9P0P8 240 aaPredicted RBP8.42□□□□□ -1.06
SMAD4-217ENST00000611848 TMEM181Q9P2C4 612 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 SUCOQ9UBS9 1254 aaKnown RBP8.42□□□□□ -1.06
SMAD4-217ENST00000611848 CD300AQ9UGN4 299 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 ZNF225Q9UK10 706 aa8.42□□□□□ -1.06
SMAD4-217ENST00000611848 TNPO3Q9Y5L0 923 aaKnown RBP8.42□□□□□ -1.06
SMAD4-217ENST00000611848 ZFHX4Q86UP3 3567 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 FER1L5A0AVI2 2057 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 A0A0J9YVX5 310 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 NCF1BA6NI72 391 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-217ENST00000611848 NCF1CA8MVU1 366 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-217ENST00000611848 H3BMH7 237 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 H7BY64 318 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 MRASO14807 208 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 ZSCAN9O15535 394 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-217ENST00000611848 CTSVO60911 334 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 NTRK1P04629 796 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 CCNYL3P0C7X3 344 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 LINC00032P0C843 101 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 NCF1P14598 390 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-217ENST00000611848 IDO1P14902 403 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 GRK3P35626 688 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 SLC6A12P48065 614 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 ABHD18Q0P651 414 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 TRAP1Q12931 704 aaKnown RBP8.41□□□□□ -1.06
SMAD4-217ENST00000611848 FLOT2Q14254 428 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 PTCHD3Q3KNS1 767 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 MMEL1Q495T6 779 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 COQ5Q5HYK3 327 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 YOD1Q5VVQ6 348 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-217ENST00000611848 BROXQ5VW32 411 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 FBXO42Q6P3S6 717 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 IZUMO2Q6UXV1 221 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 ADCK2Q7Z695 626 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 THOC6Q86W42 341 aaKnown RBP8.41□□□□□ -1.06
SMAD4-217ENST00000611848 SPACA3Q8IXA5 215 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 DDIASQ8IXT1 998 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 MIER2Q8N344 545 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 IL22RA1Q8N6P7 574 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 HIPK4Q8NE63 616 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 ABHD11Q8NFV4 315 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 OR9I1Q8NGQ6 314 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 TSPEARQ8WU66 669 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 NKD1Q969G9 470 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 ASB9Q96DX5 294 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 ZNF285Q96NJ3 590 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 PRAP1Q96NZ9 151 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 GPATCH1Q9BRR8 931 aaKnown RBP8.41□□□□□ -1.06
SMAD4-217ENST00000611848 EFHD1Q9BUP0 239 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 KLHL4Q9C0H6 718 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 SLC7A5P2Q9GIP4 190 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 435.6 ms