RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 PROSCO94903 275 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 PGM3O95394 542 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 ACSL3O95573 720 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 GH1P01241 217 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 IGLV1-44P01699 117 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 ATP5BP06576 529 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 TRIM49P0CI25 452 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 TRIM49CP0CI26 452 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 NEFHP12036 1026 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 ATP6V1B1P15313 513 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 ATP6V1E1P36543 226 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 VHLP40337 213 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 CETN2P41208 172 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 CTCFP49711 727 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 CLK1P49759 484 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 LUMP51884 338 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 RAP1GDS1P52306 607 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 LMO4P61968 165 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 COG7P83436 770 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 PPARDQ03181 441 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 KLC1Q07866 573 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 MED22Q15528 200 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 GSTA3Q16772 222 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 COL28A1Q2UY09 1125 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 CEP55Q53EZ4 464 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 TECRLQ5HYJ1 363 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 LRRC38Q5VT99 294 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 KRT39Q6A163 491 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 OR52E8Q6IFG1 317 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 PRR5LQ6MZQ0 368 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 RBMS3Q6XE24 437 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 ANO5Q75V66 913 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 GPR180Q86V85 440 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 SLC47A2Q86VL8 602 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 NRROSQ86YC3 692 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 C4orf19Q8IY42 314 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 KATNAL2Q8IYT4 538 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 SYCP3Q8IZU3 236 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 KIRREL3Q8IZU9 778 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 ARHGAP18Q8N392 663 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 KIF2BQ8N4N8 673 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 WDTC1Q8N5D0 677 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 FRMD1Q8N878 549 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 AVL9Q8NBF6 648 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 C1orf54Q8WWF1 131 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 DNAJC9Q8WXX5 260 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 RSPH1Q8WYR4 309 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 ZNF75CPQ92670 426 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 PRCCQ92733 491 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 SEMA4DQ92854 862 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 NSL1Q96IY1 281 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 ART5Q96L15 291 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 NR1H4Q96RI1 486 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 NUDCD1Q96RS6 583 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 EGFL8Q99944 293 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 SYT15Q9BQS2 421 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 PYGO2Q9BRQ0 406 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 DCTN5Q9BTE1 182 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 H2AFJQ9BTM1 129 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 FRMD8P1Q9BZ68 369 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 OSBPL8Q9BZF1 889 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 VCXQ9H320 206 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 DENND2DQ9H6A0 471 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 KIF9Q9HAQ2 790 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 MRPL47Q9HD33 250 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 RAB20Q9NX57 234 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 MARCH4Q9P2E8 410 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 WDR35Q9P2L0 1181 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 MTRRQ9UBK8 725 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 MORF4L1Q9UBU8 362 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 SLC25A10Q9UBX3 287 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 HAO1Q9UJM8 370 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 STK38LQ9Y2H1 464 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 C2CD2Q9Y426 696 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 KCNE2Q9Y6J6 123 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 THSD7AQ9UPZ6 1657 aa3.71□□□□□ -1.81
SMCHD1-208ENST00000583344 A0A1W2PQ09 198 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 ARHGEF35A5YM69 484 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 NPIPB15A6NHN6 443 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 TMEM110-MUSTN1A8MSY1 372 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 MYO1GB0I1T2 1018 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 E7ESA3 106 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 MPHOSPH10O00566 681 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 KLF11O14901 512 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 TM9SF1O15321 606 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 TNFSF14O43557 240 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 MAGEC1O60732 1142 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 ENTPD3O75355 529 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 CSDE1O75534 798 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 ZNF821O75541 412 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 NDUFB10O96000 172 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 POLR2MP0CAP2 368 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 TROVE2P10155 538 aaKnown RBP eCLIP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 SAT1P21673 171 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 HMGB2P26583 209 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 HOXC8P31273 242 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 RPA3P35244 121 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 FASLGP48023 281 aa3.71□□□□□ -1.82
SMCHD1-208ENST00000583344 GCLMP48507 274 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms